RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 DVL1P1P54792 670 aaPredicted RBP11.6□□□□□ -0.55
CDK3-201ENST00000425876 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
CDK3-201ENST00000425876 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
CDK3-201ENST00000425876 ZNF430Q9H8G1 570 aaPredicted RBP11.6□□□□□ -0.55
CDK3-201ENST00000425876 TBL2Q9Y4P3 447 aaKnown RBP11.6□□□□□ -0.55
CDK3-201ENST00000425876 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
CDK3-201ENST00000425876 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 TIMM23O14925 209 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 MPDU1O75352 247 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 TOX4O94842 621 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 FHITP49789 147 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 UBE2E1P51965 193 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 PSG5Q15238 335 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 CFHR4Q92496 578 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 RITA1Q96K30 269 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 HINT2Q9BX68 163 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 RFNGQ9Y644 331 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 TACC2O95359 2948 aa11.59□□□□□ -0.55
CDK3-201ENST00000425876 SOX15O60248 233 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 VENTXO95231 258 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 TSPAN15O95858 294 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 CA2P00918 260 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 IFNA4P05014 189 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.55
CDK3-201ENST00000425876 ZNF616Q08AN1 781 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 PRSS8Q16651 343 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 LFNGQ8NES3 379 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 TBX15Q96SF7 602 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 SIGLEC9Q9Y336 463 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 FBXO7Q9Y3I1 522 aa11.58□□□□□ -0.55
CDK3-201ENST00000425876 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 SPG11Q96JI7 2443 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 IGHV4-61A0A0C4DH41 118 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 BTBD17A6NE02 478 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 FGF7P21781 194 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 LGALS4P56470 323 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
CDK3-201ENST00000425876 LPAR2Q9HBW0 351 aa11.58□□□□□ -0.56
CDK3-201ENST00000425876 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 FAM157AC9JC47 383 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 MBP02144 154 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 OPN1MWP04001 364 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 OPN1MW2P0DN77 364 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 OPN1MW3P0DN78 364 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
CDK3-201ENST00000425876 SNCAP37840 140 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 PAX8Q06710 450 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 PPP1R27Q86WC6 154 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 PERPQ96FX8 193 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 NPCDR1Q9BY65 106 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
CDK3-201ENST00000425876 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 MOSP00540 346 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 HBE1P02100 147 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 H2AFB1P0C5Y9 115 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 TMEM41BQ5BJD5 291 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 MED13LQ71F56 2210 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 NPBQ8NG41 125 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 TPSG1Q9NRR2 321 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 RPRMQ9NS64 109 aa11.56□□□□□ -0.56
CDK3-201ENST00000425876 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
CDK3-201ENST00000425876 FBN2P35556 2912 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 A0A1B0GW64 132 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 E7EUB6 86 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 ACTL6BO94805 426 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 CD5P06127 495 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 SLC25A16P16260 332 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 CNTFRP26992 372 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 COMPP49747 757 aaPredicted RBP11.55□□□□□ -0.56
CDK3-201ENST00000425876 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDK3-201ENST00000425876 EBI3Q14213 229 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
CDK3-201ENST00000425876 NOTCH2Q04721 2471 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
CDK3-201ENST00000425876 TMEM218A2RU14 115 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 NDUFA3O95167 84 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 GPX4P36969 197 aaPredicted RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 RPL27AP46776 148 aaKnown RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 RAB2AP61019 212 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 WT1-ASQ06250 92 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 SSX2Q16385 188 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 C10orf55Q5SWW7 151 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms