RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LRRTM1Q86UE6 522 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 OR4S2Q8NH73 311 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 ZNRF2Q8NHG8 242 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 APH1BQ8WW43 257 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 ARHGAP5-AS1Q96IT6 56 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 URM1Q9BTM9 101 aaKnown RBP7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 BET1LQ9NYM9 111 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 C21orf62Q9NYP8 219 aa7.43□□□□□ -1.22
RAPGEF1-205ENST00000419442 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 IGHV3-49A0A0A0MS15 119 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 SAC3D1A6NKF1 404 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 NUPL2O15504 423 aaKnown RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 IGLV2-14P01704 120 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 CD1AP06126 327 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 CTSGP08311 255 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 FCGR3AP08637 254 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 SPART-AS1P0CW21 52 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 MAPK3P27361 379 aaPredicted RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 OR2B11Q5JQS5 317 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 PLAC9Q5JTB6 97 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 GDPD1Q8N9F7 314 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 SCARB1Q8WTV0 552 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 FRZBQ92765 325 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 YTHDF1Q9BYJ9 559 aaKnown RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 MS4A6AQ9H2W1 248 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 VSIRQ9H7M9 311 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 CLEC5AQ9NY25 188 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 CLEC2DQ9UHP7 191 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 RBMX2Q9Y388 322 aaKnown RBP7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
RAPGEF1-205ENST00000419442 K7EIM0 57 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 EI24O14681 340 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 CYB5BO43169 146 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 FGF2P09038 288 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 CRHBPP24387 322 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 TAS2R43P59537 309 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 OXA1LQ15070 435 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 TIMM50Q3ZCQ8 353 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 THOC7Q6I9Y2 204 aaKnown RBP7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 PHYHIPQ92561 330 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 GRAMD2BQ96HH9 432 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 NEU1Q99519 415 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 GINS4Q9BRT9 223 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 DIMT1Q9UNQ2 313 aaKnown RBP7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 ORC6Q9Y5N6 252 aa7.41□□□□□ -1.22
RAPGEF1-205ENST00000419442 IGHV3OR16-13A0A075B7E8 117 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 TRAV14DV4A0A0A6YYC5 116 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 IGHV3-74A0A0B4J1X5 117 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 K7EQG2 157 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 GYG2O15488 501 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 WBP4O75554 376 aaKnown RBP7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 HRASP01112 189 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 CD36P16671 472 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 RELQ04864 619 aaPredicted RBP7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 PLA2G7Q13093 441 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 Q6ZS49 121 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 DUSP18Q8NEJ0 188 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 SLC7A6OSQ96CW6 309 aaPredicted RBP7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 HSD17B10Q99714 261 aaKnown RBP7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 KCNK7Q9Y2U2 307 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 TMED3Q9Y3Q3 217 aa7.4□□□□□ -1.22
RAPGEF1-205ENST00000419442 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 TMEM189A5PLL7 270 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 ERICH4A6NGS2 130 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 KNCNA6PVL3 124 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 DNASE2O00115 360 aaPredicted RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 RAB27BO00194 218 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 EBAG9O00559 213 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 SLC22A5O76082 557 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 HLA-DQB1P01920 261 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 SERPINE2P07093 398 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 MYL12AP19105 171 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 WT1-ASQ06250 92 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 POU2AF1Q16633 256 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 SMN1Q16637 294 aaKnown RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 UBE2UQ5VVX9 321 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 SLC25A24Q6NUK1 477 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 TMEM88Q6PEY1 159 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 ZNF773Q6PK81 442 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 ZNF705AQ6ZN79 300 aaPredicted RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 HSD17B13Q7Z5P4 300 aaPredicted RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 C15orf53Q8NAA6 179 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 OR10W1Q8NGF6 305 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 NIPSNAP3BQ9BS92 247 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 CENPOQ9BU64 300 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 DKK2Q9UBU2 259 aa7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 RRP15Q9Y3B9 282 aaKnown RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
RAPGEF1-205ENST00000419442 IGHV3-21A0A0B4J1V1 117 aa7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 PNMA8CA0A1B0GUJ8 204 aa7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 SMIM9A6NGZ8 99 aa7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 UPK2O00526 184 aa7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 ST8SIA3O43173 380 aa7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 ZNF705DP0CH99 300 aaPredicted RBP7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 ZNF705BP0CI00 300 aaPredicted RBP7.38□□□□□ -1.23
RAPGEF1-205ENST00000419442 INSL4Q14641 139 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms