RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DYNLRB2Q8TF09 96 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 ZNF414Q96IQ9 312 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 QTRT1Q9BXR0 403 aaKnown RBP11.36□□□□□ -0.59
UBXN4-203ENST00000416538 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
UBXN4-203ENST00000416538 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
UBXN4-203ENST00000416538 HPGDSO60760 199 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
UBXN4-203ENST00000416538 ELK1P19419 428 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 G6PCP35575 357 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 LPAR6P43657 344 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 PHLDA2Q53GA4 152 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 DEFB125Q8N687 156 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 GDPD1Q8N9F7 314 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
UBXN4-203ENST00000416538 COMMD5Q9GZQ3 224 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 LYSTQ99698 3801 aa11.35□□□□□ -0.59
UBXN4-203ENST00000416538 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
UBXN4-203ENST00000416538 GPR31O00270 319 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 IGKV1-39P01597 117 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 APOA1P02647 267 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 IGKV1D-39P04432 117 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 FGF2P09038 288 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 DEFA4P12838 97 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
UBXN4-203ENST00000416538 CBLN1P23435 193 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 TM4SF20Q53R12 229 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 LAX1Q8IWV1 398 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 CD300LFQ8TDQ1 290 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 NDUFA4L2Q9NRX3 87 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
UBXN4-203ENST00000416538 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 GABARAPO95166 117 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 DHFRP00374 187 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 KRASP01116 189 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 CLEC3BP05452 202 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 OR13C7P0DN81 318 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 CTF1Q16619 201 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 GUCA2BQ16661 112 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 RNASE12Q5GAN4 147 aaKnown RBP11.33□□□□□ -0.6
UBXN4-203ENST00000416538 BTNL8Q6UX41 500 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 OR6F1Q8NGZ6 308 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
UBXN4-203ENST00000416538 AIFM2Q9BRQ8 373 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 TUBA4BQ9H853 241 aa11.33□□□□□ -0.6
UBXN4-203ENST00000416538 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 ZNF320A2RRD8 509 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 M0QYG6 137 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 SERPINE2P07093 398 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 TRAPPC2P0DI81 140 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 TRAPPC2BP0DI82 140 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 ERVK-16P61578 105 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 UXS1Q8NBZ7 420 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 OR1L8Q8NGR8 309 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
UBXN4-203ENST00000416538 TECRQ9NZ01 308 aaKnown RBP11.32□□□□□ -0.6
UBXN4-203ENST00000416538 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
UBXN4-203ENST00000416538 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 K7EIM0 57 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 TGOLN2O43493 480 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 TPPPO94811 219 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 SCAF4O95104 1147 aaKnown RBP11.31□□□□□ -0.6
UBXN4-203ENST00000416538 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 LYL1P12980 280 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBXN4-203ENST00000416538 RCVRNP35243 200 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 ADMP35318 185 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
UBXN4-203ENST00000416538 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
UBXN4-203ENST00000416538 ISOC1Q96CN7 298 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 CMTM3Q96MX0 182 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 ZNF436Q9C0F3 470 aaPredicted RBP11.31□□□□□ -0.6
UBXN4-203ENST00000416538 SCPEP1Q9HB40 452 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 SLC2A8Q9NY64 477 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
UBXN4-203ENST00000416538 IGHV3OR16-8A0A075B7F1 116 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 ZNF57Q68EA5 555 aaPredicted RBP11.3□□□□□ -0.6
UBXN4-203ENST00000416538 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 CADM3Q8N126 398 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
UBXN4-203ENST00000416538 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms