RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 HLA-DRB1P01911 266 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 C1QTNF9P0C862 333 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 FGF5P12034 268 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 BMI1P35226 326 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 C18orf15Q96N68 181 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 IGHMP01871 453 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 SELENOTP62341 195 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 FREM1Q5H8C1 2179 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 FAM214BQ7L5A3 538 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 LHFPL1Q86WI0 220 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF714Q96N38 554 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 TM2D1Q9BX74 207 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 GATA2P23769 480 aaPredicted RBP10.92□□□□□ -0.66
SCN1B-202ENST00000415950 UCP1P25874 307 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 TXNDC17Q9BRA2 123 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 TUBA4BQ9H853 241 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 WDR54Q9H977 334 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 TRBV6-7A0A0A0MS04 114 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 MOSP00540 346 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
SCN1B-202ENST00000415950 PET117Q6UWS5 81 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 ZNRF1Q8ND25 227 aa10.92□□□□□ -0.66
SCN1B-202ENST00000415950 CDX2Q99626 313 aaPredicted RBP10.92□□□□□ -0.66
SCN1B-202ENST00000415950 NDUFA2O43678 99 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 TAS2R60P59551 318 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 BMPERQ8N8U9 685 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 CHCHD2Q9Y6H1 151 aaPredicted RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 PCNX2A6NKB5 2137 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 E9PLN8 166 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 NUDT3O95989 172 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 BEX4Q9NWD9 120 aaPredicted RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 NKX2-8O15522 239 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 CEACAM1P13688 526 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 GCHFRP30047 84 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF124Q15973 351 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
SCN1B-202ENST00000415950 NFAM1Q8NET5 270 aaPredicted RBP10.91□□□□□ -0.66
SCN1B-202ENST00000415950 C17orf98A8MV24 154 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 UCP3P55916 312 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 CFHR1Q03591 330 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 FAM89BQ8N5H3 189 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 S4R3C0 116 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 A0A1W2PR77 199 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 CGAP01215 116 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 AMY1AP04745 511 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 LOXL3P58215 753 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 RPL39P5Q59GN2 51 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 PRR7Q8TB68 274 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
SCN1B-202ENST00000415950 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 TBL2Q9Y4P3 447 aaKnown RBP10.9□□□□□ -0.66
SCN1B-202ENST00000415950 IGKV1-27A0A075B6S5 117 aa10.9□□□□□ -0.66
SCN1B-202ENST00000415950 IFI6P09912 130 aa10.9□□□□□ -0.67
SCN1B-202ENST00000415950 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.67
SCN1B-202ENST00000415950 CDC42EP3Q9UKI2 254 aa10.9□□□□□ -0.67
SCN1B-202ENST00000415950 IGHV3OR16-8A0A075B7F1 116 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 IGHV1-45A0A0A0MS14 117 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 IGHV3-49A0A0A0MS15 119 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 C21orf140B9A014 251 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 SYNGR3O43761 229 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 AMBPP02760 352 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 TNFSF10P50591 281 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 PCOLCEQ15113 449 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 SCO2A0A1W2PP80 73 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 ATP1A1-AS1Q5TC04 95 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 CDX4O14627 284 aaPredicted RBP10.89□□□□□ -0.67
SCN1B-202ENST00000415950 GPR6P46095 362 aaPredicted RBP10.89□□□□□ -0.67
SCN1B-202ENST00000415950 LINC00205P59089 165 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 FAM201AQ5SY85 155 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 CDPF1Q6NVV7 123 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 MIEN1Q9BRT3 115 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 COL4A6Q14031 1691 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 C2CD3Q4AC94 2353 aa10.89□□□□□ -0.67
SCN1B-202ENST00000415950 OR10AG1Q8NH19 301 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 DEPPQ9NTK1 212 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 PTPRQQ9UMZ3 2332 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 CACNA1AO00555 2505 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 A0A1B0GUS0 222 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 DLL1O00548 723 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 C18orf12Q96KH6 178 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 RAMP3O60896 148 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 ARF6P62330 175 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 NDUFAF3Q9BU61 184 aa10.88□□□□□ -0.67
SCN1B-202ENST00000415950 NCOA6Q14686 2063 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms