RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 WASHC3Q9Y3C0 194 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 LSM5Q9Y4Y9 91 aaKnown RBP12.34□□□□□ -0.43
LINC00116-201ENST00000414416 VENTXO95231 258 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 KIR2DS2P43631 304 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 NPBWR1P48145 328 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 REC114Q7Z4M0 266 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 PDPNQ86YL7 162 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 OR1S2Q8NGQ3 325 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
LINC00116-201ENST00000414416 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
LINC00116-201ENST00000414416 MSGN1A6NI15 193 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 FAM90A9PA6NNJ1 464 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 AP4M1O00189 453 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 IGKV1D-33P01593 117 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 IGKV1-33P01594 117 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 IGKV1-16P04430 117 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
LINC00116-201ENST00000414416 FAM106CPP0CH98 169 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 HES1Q14469 280 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 Q6YL49 198 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 TCTEX1D1Q8N7M0 179 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 SIGLECL1Q8N7X8 197 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 OR4D5Q8NGN0 318 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 A0A1B0GV90 55 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 H3BUX3 64 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 CRLF1O75462 422 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 LYL1P12980 280 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 RAB4AP20338 218 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 VDAC1P21796 283 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 LPAR6P43657 344 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 Q6ZRM9 215 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 OR4S2Q8NH73 311 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 GPR146Q96CH1 333 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 TUBA4BQ9H853 241 aa12.33□□□□□ -0.44
LINC00116-201ENST00000414416 K7EPK0 472 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00116-201ENST00000414416 IER3P46695 156 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 CXorf66Q5JRM2 361 aaPredicted RBP12.32□□□□□ -0.44
LINC00116-201ENST00000414416 C9orf152Q5JTZ5 239 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 ACOT7LQ6ZUV0 252 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 THNSL2Q86YJ6 484 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 FAM71E2Q8N5Q1 922 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 OR4C13Q8NGP0 309 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
LINC00116-201ENST00000414416 GGACTQ9BVM4 153 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 UQCC1Q9NVA1 299 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
LINC00116-201ENST00000414416 NXPH3O95157 252 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 MOSP00540 346 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 FAM157CP0CG43 387 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 SSMEM1Q8WWF3 244 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 EAF1Q96JC9 268 aaPredicted RBP12.31□□□□□ -0.44
LINC00116-201ENST00000414416 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
LINC00116-201ENST00000414416 FAM212BQ9NTI7 297 aaPredicted RBP12.31□□□□□ -0.44
LINC00116-201ENST00000414416 BTBD17A6NE02 478 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 DEDDO75618 318 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 TMEM11P17152 192 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 PPT1P50897 306 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 EBI3Q14213 229 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 HNF4GQ14541 408 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
LINC00116-201ENST00000414416 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 C14orf144Q96I85 54 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 C2orf88Q9BSF0 95 aa12.31□□□□□ -0.44
LINC00116-201ENST00000414416 DUXBA0A1W2PPF3 345 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 HOXA3O43365 443 aaPredicted RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 S1PR2O95136 353 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 HPRT1P00492 218 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 RPS16P62249 146 aaKnown RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 FBLN7Q53RD9 439 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 RNF141Q8WVD5 230 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 MAGT1Q9H0U3 335 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 NSD1Q96L73 2696 aaPredicted RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 MTORP42345 2549 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 PJVKQ0ZLH3 352 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 LY6EQ16553 131 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 ZNF418Q8TF45 676 aaPredicted RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 RITA1Q96K30 269 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 PITPNC1Q9UKF7 332 aa12.3□□□□□ -0.44
LINC00116-201ENST00000414416 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
LINC00116-201ENST00000414416 FN1P02751 2386 aaKnown RBP12.29□□□□□ -0.44
LINC00116-201ENST00000414416 KRASP01116 189 aa12.29□□□□□ -0.44
LINC00116-201ENST00000414416 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
LINC00116-201ENST00000414416 G6PCP35575 357 aa12.29□□□□□ -0.44
LINC00116-201ENST00000414416 AKR1C2P52895 323 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms