RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 OR11H7Q8NGC8 314 aa14.75□□□□□ -0.05
CDC42-204ENST00000411827 OR1L6Q8NGR2 347 aa14.75□□□□□ -0.05
CDC42-204ENST00000411827 RBMXL1Q96E39 390 aaKnown RBP14.75□□□□□ -0.05
CDC42-204ENST00000411827 RAB40CQ96S21 281 aa14.75□□□□□ -0.05
CDC42-204ENST00000411827 HIPK2Q9H2X6 1198 aa14.75□□□□□ -0.05
CDC42-204ENST00000411827 A0A1B0GUS0 222 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 MSGN1A6NI15 193 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 CEBPZOSA8MTT3 80 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 SYNGR2O43760 224 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 TAS2R30P59541 319 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 RPP30P78346 268 aaKnown RBP14.74□□□□□ -0.05
CDC42-204ENST00000411827 SSBP2P81877 361 aaPredicted RBP14.74□□□□□ -0.05
CDC42-204ENST00000411827 OR4F5Q8NH21 305 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 GRPEL2Q8TAA5 225 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 ABHD5Q8WTS1 349 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 HSPB9Q9BQS6 159 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 ZNF702PQ9H963 129 aa14.74□□□□□ -0.05
CDC42-204ENST00000411827 CXCL3P19876 107 aa14.73□□□□□ -0.05
CDC42-204ENST00000411827 SUB1P53999 127 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDC42-204ENST00000411827 CXorf66Q5JRM2 361 aaPredicted RBP14.73□□□□□ -0.05
CDC42-204ENST00000411827 PARP11Q9NR21 331 aa14.73□□□□□ -0.05
CDC42-204ENST00000411827 U3KQ87 197 aa14.73□□□□□ -0.05
CDC42-204ENST00000411827 TNCP24821 2201 aa14.73□□□□□ -0.05
CDC42-204ENST00000411827 SVEP1Q4LDE5 3571 aa14.73□□□□□ -0.05
CDC42-204ENST00000411827 NPIPB5A8MRT5 1133 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 SCAF4O95104 1147 aaKnown RBP14.72□□□□□ -0.05
CDC42-204ENST00000411827 BRI3O95415 125 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 SIX6O95475 246 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 PSMB6P28072 239 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 VDAC2P45880 294 aaPredicted RBP14.72□□□□□ -0.05
CDC42-204ENST00000411827 HOXA1P49639 335 aaPredicted RBP14.72□□□□□ -0.05
CDC42-204ENST00000411827 SLC35B1P78383 322 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 DTD1Q8TEA8 209 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 HINT2Q9BX68 163 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 HEYLQ9NQ87 328 aaPredicted RBP14.72□□□□□ -0.05
CDC42-204ENST00000411827 WSB1Q9Y6I7 421 aa14.72□□□□□ -0.05
CDC42-204ENST00000411827 TRAV41A0A0B4J266 112 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 TMEM89A2RUT3 159 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 H3BUA1 57 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 ATP6V0E1O15342 81 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 MBPP02686 304 aaPredicted RBP14.71□□□□□ -0.05
CDC42-204ENST00000411827 SNCAP37840 140 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 HTR2BP41595 481 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 Q6ZSV7 163 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 TTC9CQ8N5M4 171 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 COMMD1Q8N668 190 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 PPP1R1CQ8WVI7 109 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 SMIM8Q96KF7 97 aa14.71□□□□□ -0.05
CDC42-204ENST00000411827 JMJD1CQ15652 2540 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 IGLC7A0M8Q6 106 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 TEX22C9J3V5 150 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 CRYGCP07315 174 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 EGR2P11161 476 aaPredicted RBP14.7□□□□□ -0.06
CDC42-204ENST00000411827 RPL23AP62750 156 aaKnown RBP14.7□□□□□ -0.06
CDC42-204ENST00000411827 NDPQ00604 133 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 C10orf55Q5SWW7 151 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 UNQ5815/PRO19632Q6UWF5 114 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 STPG2Q8N412 459 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 OR2C3Q8N628 320 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 ZNF114Q8NC26 417 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 RBKSQ9H477 322 aa14.7□□□□□ -0.06
CDC42-204ENST00000411827 hCG_2014768A0A024R1R8 64 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 K7EPK0 472 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 L7N2F9 121 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 SCGB1D2O95969 90 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 OPN1MWP04001 364 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 OPN1MW2P0DN77 364 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 OPN1MW3P0DN78 364 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 OR13C7P0DN81 318 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 HKR1P10072 659 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 HIST1H1BP16401 226 aaKnown RBP14.69□□□□□ -0.06
CDC42-204ENST00000411827 VAMP2P63027 116 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 RAB32Q13637 225 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 AKAP14Q86UN6 197 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 LFNGQ8NES3 379 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 FAM110DQ8TAY7 271 aaPredicted RBP14.69□□□□□ -0.06
CDC42-204ENST00000411827 THAP6Q8TBB0 222 aa14.69□□□□□ -0.06
CDC42-204ENST00000411827 CGB1A6NKQ9 187 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 E5RGE8 158 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 CORTO00230 105 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 TSC22D2O75157 780 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 DEDDO75618 318 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 CCNKO75909 580 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 MPC2O95563 127 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 S100A10P60903 97 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 POLR2GP62487 172 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDC42-204ENST00000411827 C19orf54Q5BKX5 351 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 OR1P1Q8NH06 330 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 SERTAD4Q9NUC0 356 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 THYN1Q9P016 225 aa14.68□□□□□ -0.06
CDC42-204ENST00000411827 A0A1B0GW64 132 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 SH2D7A6NKC9 451 aaPredicted RBP14.67□□□□□ -0.06
CDC42-204ENST00000411827 E7EUB6 86 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 CTRB1P17538 263 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 WT1-ASQ06250 92 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 FOXL1Q12952 345 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 KLK9Q2XQG4 91 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 BSXQ3C1V8 233 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 CTRB2Q6GPI1 263 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 PRSS54Q6PEW0 395 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms