RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
MRPL55-220ENST00000411464 MAP6D1Q9H9H5 199 aa12.36□□□□□ -0.43
MRPL55-220ENST00000411464 TRAV3A0A0B4J244 114 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 NOTOA8MTQ0 251 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 NDUFA4O00483 81 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 MRPS14O60783 128 aaKnown RBP12.35□□□□□ -0.43
MRPL55-220ENST00000411464 SLC25A24Q6NUK1 477 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 SPSB3Q6PJ21 355 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 ZNF773Q6PK81 442 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 SLC5A7Q9GZV3 580 aa12.35□□□□□ -0.43
MRPL55-220ENST00000411464 SERPINE2P07093 398 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 TRAPPC2P0DI81 140 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 TRAPPC2BP0DI82 140 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 HSD17B13Q7Z5P4 300 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-220ENST00000411464 BEST4Q8NFU0 473 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 DAPK2Q9UIK4 370 aa12.34□□□□□ -0.43
MRPL55-220ENST00000411464 K7EMT4 169 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 S1PR2O95136 353 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 PPYP01298 95 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-220ENST00000411464 FGF2P09038 288 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 PTHLHP12272 177 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 FCGR2BP31994 310 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-220ENST00000411464 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
MRPL55-220ENST00000411464 APRG1Q8IVJ8 170 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 RARRES2Q99969 163 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 MFFQ9GZY8 342 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 PLEKHA2Q9HB19 425 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 C21orf62Q9NYP8 219 aa12.33□□□□□ -0.44
MRPL55-220ENST00000411464 IGHV3OR16-8A0A075B7F1 116 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 MPTX1A8MV57 137 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 ZNF207O43670 478 aaKnown RBP12.32□□□□□ -0.44
MRPL55-220ENST00000411464 IFNA4P05014 189 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 CMC4P56277 68 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-220ENST00000411464 FXYD4P59646 89 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 ERVK-16P61578 105 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 TPRA1Q86W33 373 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 TSPAN14Q8NG11 270 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 OR1L8Q8NGR8 309 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 SCARB1Q8WTV0 552 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 GATAD1Q8WUU5 269 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
MRPL55-220ENST00000411464 A0A087WXM4 84 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 IGHV3-21A0A0B4J1V1 117 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 C15orf62A8K5M9 175 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 WT1-ASQ06250 92 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 Q56UQ5 140 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 AADACL3Q5VUY0 350 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 GVQW1Q8N7I0 195 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 FBXL17Q9UF56 701 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 SMPXQ9UHP9 88 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 FRAS1Q86XX4 4008 aa12.31□□□□□ -0.44
MRPL55-220ENST00000411464 TRAV18A0A075B6X5 111 aa12.3□□□□□ -0.44
MRPL55-220ENST00000411464 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 RBMS2Q15434 407 aaKnown RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
MRPL55-220ENST00000411464 LSM10Q969L4 123 aaKnown RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 TXNL4BQ9NX01 149 aaKnown RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 COMMD9Q9P000 198 aa12.3□□□□□ -0.44
MRPL55-220ENST00000411464 F11RQ9Y624 299 aaKnown RBP12.3□□□□□ -0.44
MRPL55-220ENST00000411464 FCER2P06734 321 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 SMIM18P0DKX4 95 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 ADMP35318 185 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 TFPI2P48307 235 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 NEDD8Q15843 81 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 UBE2UQ5VVX9 321 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 TMEM17Q86X19 198 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 GIMAP1Q8WWP7 306 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 RNF2Q99496 336 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 NDUFA4L2Q9NRX3 87 aa12.29□□□□□ -0.44
MRPL55-220ENST00000411464 HERC2O95714 4834 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 SNAPC5O75971 98 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 YIF1AO95070 293 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms