RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 CRIP2P52943 208 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 SSBP2P81877 361 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 PRCDQ00LT1 54 aa13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 C2orf68Q2NKX9 166 aa13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 NDUFA4L2Q9NRX3 87 aa13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
TSPAN4-208ENST00000409531 ANK2Q01484 3957 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 A0A1W2PN81 502 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 MSGN1A6NI15 193 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 MED6O75586 246 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 OPN1MWP04001 364 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 OPN1MW2P0DN77 364 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 OPN1MW3P0DN78 364 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 CHRNA7P36544 502 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 PROK1P58294 105 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 NDPQ00604 133 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 TNFRSF9Q07011 255 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 C10orf55Q5SWW7 151 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 Q6ZS46 218 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 OR4D5Q8NGN0 318 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 FYTTD1Q96QD9 318 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 NMES1Q9C002 83 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 ENY2Q9NPA8 101 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 HSPB7Q9UBY9 170 aa13.01□□□□□ -0.33
TSPAN4-208ENST00000409531 MYOD1P15172 320 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 NKX2-1P43699 371 aaPredicted RBP13□□□□□ -0.33
TSPAN4-208ENST00000409531 FCN2Q15485 313 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 ASB13Q8WXK3 278 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 FAM103A1Q9BTL3 118 aaKnown RBP13□□□□□ -0.33
TSPAN4-208ENST00000409531 PLEKHA3Q9HB20 300 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 ZFP57Q9NU63 452 aa13□□□□□ -0.33
TSPAN4-208ENST00000409531 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 CEBPZOSA8MTT3 80 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 WRBO00258 174 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 SIX6O95475 246 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 LY86O95711 162 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 HOXA1P49639 335 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 H2BFSP57053 126 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 ID3Q02535 119 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 UNQ5815/PRO19632Q6UWF5 114 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 STPG2Q8N412 459 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
TSPAN4-208ENST00000409531 TRAV41A0A0B4J266 112 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 TEX22C9J3V5 150 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 E7EUB6 86 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 NXPH3O95157 252 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 SCGB1D2O95969 90 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 EGR2P11161 476 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 CXCL3P19876 107 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 ERHP84090 104 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 ECSCRQ19T08 205 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 OR11H7Q8NGC8 314 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 CIB3Q96Q77 187 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 HIPK2Q9H2X6 1198 aa12.98□□□□□ -0.33
TSPAN4-208ENST00000409531 A0A1B0GW64 132 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 HMX3A6NHT5 357 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 CGB1A6NKQ9 187 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 SYNGR2O43760 224 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 SLC35B1P78383 322 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 NOL4LQ96MY1 436 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 CITED1Q99966 193 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 ZNF436Q9C0F3 470 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 RBKSQ9H477 322 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 SERTAD4Q9NUC0 356 aa12.97□□□□□ -0.33
TSPAN4-208ENST00000409531 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 IGLC7A0M8Q6 106 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 NPIPB5A8MRT5 1133 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 KRTAP10-3P60369 221 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 IL15RAQ13261 267 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 SPINK9Q5DT21 86 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 TTC9CQ8N5M4 171 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 OR10W1Q8NGF6 305 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 HEYLQ9NQ87 328 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
TSPAN4-208ENST00000409531 G3V318 75 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 CYB5BO43169 146 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 MBPP02686 304 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 RLN2P04090 185 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 PET100P0DJ07 73 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 APELAP0DMC3 54 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 AREGP15514 252 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 PVALBP20472 110 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 PSMB6P28072 239 aa12.95□□□□□ -0.34
TSPAN4-208ENST00000409531 SNCAP37840 140 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms