RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 GPR137BO60478 399 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 P0C879 139 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 IAPPP10997 89 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 TPT1P13693 172 aaKnown RBP12.39□□□□□ -0.43
COL25A1-201ENST00000399126 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL25A1-201ENST00000399126 MEF2CQ06413 473 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-201ENST00000399126 PERPQ96FX8 193 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 FAM210BQ96KR6 192 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
COL25A1-201ENST00000399126 CST7O76096 145 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 SMCO3A2RU48 225 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 IGFBP2P18065 325 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 AWAT1Q58HT5 328 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-201ENST00000399126 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
COL25A1-201ENST00000399126 SLC25A6P12236 298 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 DAOP14920 347 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 RAB7AP51149 207 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 MIDNQ504T8 468 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
COL25A1-201ENST00000399126 DTX2Q86UW9 622 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 TMEM252Q8N6L7 170 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 TGOLN2O43493 480 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 FABP4P15090 132 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 DLX6P56179 175 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-201ENST00000399126 SPINK9Q5DT21 86 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
COL25A1-201ENST00000399126 DDB2Q92466 427 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 RAB9BQ9NP90 201 aa12.37□□□□□ -0.43
COL25A1-201ENST00000399126 A6NNC1 897 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 RAB29O14966 203 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 C11orf42Q8N5U0 333 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
COL25A1-201ENST00000399126 FHITP49789 147 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 TMEM267Q0VDI3 215 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-201ENST00000399126 HAGHQ16775 308 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 TMEM155Q4W5P6 130 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 GPR157Q5UAW9 335 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 CELSR1Q9NYQ6 3014 aa12.36□□□□□ -0.43
COL25A1-201ENST00000399126 TAAR5O14804 337 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 SYNGR2O43760 224 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 PF4P02776 101 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 OR9G9P0C7N8 305 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 ATP5J2P56134 94 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 DIAPH2-AS1Q14236 149 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 S1PR3Q99500 378 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 REG1BP48304 166 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
COL25A1-201ENST00000399126 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 HELTA6NFD8 242 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 SCGB2A1O75556 95 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 CD5P06127 495 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 PGPEP1Q9NXJ5 209 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 CEACAM3P40198 252 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 DYNLT3P51808 116 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-201ENST00000399126 PDZD11Q5EBL8 140 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
COL25A1-201ENST00000399126 TCTEX1D1Q8N7M0 179 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 OR5C1Q8NGR4 320 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 RBKSQ9H477 322 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 M0R036 132 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 RBMXL2O75526 392 aaKnown RBP12.34□□□□□ -0.43
COL25A1-201ENST00000399126 HPRT1P00492 218 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 CT45A6P0DMU7 189 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 CT45A5P0DMU8 189 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 CT45A7P0DMV0 189 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 SULT1A1P50225 295 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 UBE2KP61086 200 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 RHEBQ15382 184 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
COL25A1-201ENST00000399126 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-201ENST00000399126 ZFHX3Q15911 3703 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 PIGBOS1A0A0B4J2F0 54 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 A0A1B0GW15 77 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 C1QL1O75973 258 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
COL25A1-201ENST00000399126 IGKV1-16P04430 117 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 JTBO76095 146 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 PPBPP02775 128 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 ARG1P05089 322 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 IGHV1-8P0DP01 117 aa12.33□□□□□ -0.44
COL25A1-201ENST00000399126 GZMBP10144 247 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms