RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 E7EUB6 86 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 CA2P00918 260 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 OPN1MWP04001 364 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 OPN1MW2P0DN77 364 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 OPN1MW3P0DN78 364 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 PAX9P55771 341 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 TNXAQ16473 311 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 C5orf56Q8N8D9 126 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 OR1L8Q8NGR8 309 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 OR5R1Q8NH85 324 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 DTD1Q8TEA8 209 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 NDUFA4L2Q9NRX3 87 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 CEBPZOSA8MTT3 80 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 E5RGE8 158 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 FGF16O43320 207 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 AMY1AP04745 511 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 IAPPP10997 89 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 VDAC2P45880 294 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 TMEM65Q6PI78 240 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 C16orf82Q7Z2V1 217 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 GRPEL2Q8TAA5 225 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 SSMEM1Q8WWF3 244 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 DCUN1D4Q92564 292 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 ESM1Q9NQ30 184 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 TNFSF18Q9UNG2 199 aa13.42□□□□□ -0.26
TSPAN4-205ENST00000397406 ACTL6BO94805 426 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 PVALBP20472 110 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 RPL27AP46776 148 aaKnown RBP13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 GNB1P62873 340 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 ZNF546Q86UE3 836 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 RASL11BQ9BPW5 248 aa13.41□□□□□ -0.26
TSPAN4-205ENST00000397406 L7N2F9 121 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 HOXA3O43365 443 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 KCNAB3O43448 404 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 P2RY1P47900 373 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 TAS2R30P59541 319 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 VAMP2P63027 116 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 ZNF562Q6V9R5 426 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 OR10W1Q8NGF6 305 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 SRSF12Q8WXF0 261 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 VPREB3Q9UKI3 123 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 WSB1Q9Y6I7 421 aa13.4□□□□□ -0.26
TSPAN4-205ENST00000397406 IGHV7-81A0A0B4J1V7 117 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 RNF222A6NCQ9 220 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 BTBD17A6NE02 478 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 MSGN1A6NI15 193 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 ARPC5O15511 151 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 EIF2B2P49770 351 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 HILS1P60008 231 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 CX3CL1P78423 397 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 NDPQ00604 133 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 HSPB9Q9BQS6 159 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 PLEKHA3Q9HB20 300 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 LYRM2Q9NU23 88 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 TENM1Q9UKZ4 2725 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 H3BP45 60 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 M0QZK8 103 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 GPR137BO60478 399 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 TSC22D2O75157 780 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 LY86O95711 162 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 RPL23AP62750 156 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 FXYD3Q14802 87 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 OR2C3Q8N628 320 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 HEYLQ9NQ87 328 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-205ENST00000397406 A0A1W2PN81 502 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 IGLC7A0M8Q6 106 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 FAM24AA6NFZ4 105 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 SH2D7A6NKC9 451 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 CNIH1O95406 144 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 HKR1P10072 659 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 CXCL2P19875 107 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 CHRNA7P36544 502 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 LGALSLQ3ZCW2 172 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 LAMTOR1Q6IAA8 161 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 C9orf62Q8N4C0 152 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 AQP10Q96PS8 301 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 ENY2Q9NPA8 101 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
TSPAN4-205ENST00000397406 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms