RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 Q8N976 141 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 DDB2Q92466 427 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 TUBG2Q9NRH3 451 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 SLC25A10Q9UBX3 287 aaPredicted RBP10.97□□□□□ -0.65
TRIM40-207ENST00000396581 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 DMXL2Q8TDJ6 3036 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 FCN1O00602 326 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 IGKV3-15P01624 115 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 KIR2DS2P43631 304 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 COX19Q49B96 90 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
TRIM40-207ENST00000396581 TRAV3A0A0B4J244 114 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 MT-ND6P03923 174 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 GPX1P07203 203 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 LINC00614P0C842 121 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 ERVK-16P61578 105 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 DCTN5Q9BTE1 182 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 VAMP8Q9BV40 100 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 TMEM140Q9NV12 185 aa10.96□□□□□ -0.65
TRIM40-207ENST00000396581 C15orf61A6NNL5 157 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 SNURFLB1AK76 121 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 F2Z2F3 143 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 F2RL2O00254 374 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 ITGB1BP1O14713 200 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 MMP23AO75900 390 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 HNF1AP20823 631 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 CTRLP40313 264 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 IER3P46695 156 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 LOXL3P58215 753 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 CX3CL1P78423 397 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 RELQ04864 619 aaPredicted RBP10.96□□□□□ -0.66
TRIM40-207ENST00000396581 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 SPATA31B1PQ5VZV4 182 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 Q6ZS92 163 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 LRP11Q86VZ4 500 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 NEUROG1Q92886 237 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 FOXA2Q9Y261 457 aaPredicted RBP10.96□□□□□ -0.66
TRIM40-207ENST00000396581 GOLT1BQ9Y3E0 138 aa10.96□□□□□ -0.66
TRIM40-207ENST00000396581 DIDO1Q9BTC0 2240 aaKnown RBP10.95□□□□□ -0.66
TRIM40-207ENST00000396581 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 M0R1X1 148 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 FOXH1O75593 365 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 REG1AP05451 166 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 LINC00869P0C866 280 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 BAGE2Q86Y30 109 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 ST6GALNAC3Q8NDV1 305 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 SSMEM1Q8WWF3 244 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 LPAR2Q9HBW0 351 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 TMEM14BQ9NUH8 114 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
TRIM40-207ENST00000396581 LYZL6O75951 148 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 FRMD6-AS1P0C7T7 363 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 PRDX2P32119 198 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 RAB31Q13636 194 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 WDR73Q6P4I2 378 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 Q6ZT83 130 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 VKORC1L1Q8N0U8 176 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 SLC24A4Q8NFF2 622 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 RNF2Q99496 336 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 S1PR3Q99500 378 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 CLCF1Q9UBD9 225 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 MSRB2Q9Y3D2 182 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 NPY1RP25929 384 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 ZNF134P52741 427 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 RPL19P84098 196 aaKnown RBP10.94□□□□□ -0.66
TRIM40-207ENST00000396581 RPL39P5Q59GN2 51 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 MBNL2Q5VZF2 373 aaKnown RBP10.94□□□□□ -0.66
TRIM40-207ENST00000396581 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 OR4P4Q8NGL7 312 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 CORO2AQ92828 525 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 TMEM167BQ9NRX6 74 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 GNG12Q9UBI6 72 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
TRIM40-207ENST00000396581 CGAP01215 116 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 C1orf174Q8IYL3 243 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 OR4S2Q8NH73 311 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 SARAFQ96BY9 339 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 DOCK7Q96N67 2140 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 RBM14Q96PK6 669 aaKnown RBP10.93□□□□□ -0.66
TRIM40-207ENST00000396581 DCAF16Q9NXF7 216 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 IL19Q9UHD0 177 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 SPENQ96T58 3664 aaKnown RBP10.93□□□□□ -0.66
TRIM40-207ENST00000396581 SVILO95425 2214 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 A6NNC1 897 aa10.93□□□□□ -0.66
TRIM40-207ENST00000396581 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms