RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 GATAD1Q8WUU5 269 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-203ENST00000394872 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 OR10S1Q8NGN2 331 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 ANKRD36A6QL64 1941 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 IGHV3OR16-8A0A075B7F1 116 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 PROB1E7EW31 1015 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 KIAA1644Q3SXP7 199 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 PAPPA-AS1Q5QFB9 102 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 WDR82Q6UXN9 313 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 THBDP07204 575 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-203ENST00000394872 SEMA5BQ9P283 1151 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 METRNQ9UJH8 293 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 PATJQ8NI35 1801 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 C17orf98A8MV24 154 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 HLA-DRB1P01911 266 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 FAM90A1Q86YD7 464 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 NMBP08949 121 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 OTOFQ9HC10 1997 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 IGFBP2P18065 325 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 PLP1P60201 277 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 STHQ8IWL8 128 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 PRSS22Q9GZN4 317 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 TRAV24A0A0B4J272 114 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 NPIPB9F8W1W9 429 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 NPIPB7O75200 414 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 DANCRP0C864 163 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 ZNF385CQ66K41 422 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-203ENST00000394872 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 ZNF837Q96EG3 531 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-203ENST00000394872 TM2D1Q9BX74 207 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 SCN10AQ9Y5Y9 1956 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 PSME4Q14997 1843 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 H2BFSP57053 126 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 TRBV9A0A0B4J1U6 114 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 NBEAP1P0C6P0 100 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 NPCDR1Q9BY65 106 aa8.75□□□□□ -1.01
COL4A6-203ENST00000394872 DNAJC13O75165 2243 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 BRCA1P38398 1863 aaKnown RBP8.74□□□□□ -1.01
COL4A6-203ENST00000394872 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 HBBP68871 147 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 NSUN5P1Q3KNT7 163 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 WNK3Q9BYP7 1800 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 CCL3L1P16619 93 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 DMRTA2Q96SC8 542 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
COL4A6-203ENST00000394872 CKAP5Q14008 2032 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 DOCK3Q8IZD9 2030 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 WDR90Q96KV7 1748 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 A0A0G2JK05 382 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-203ENST00000394872 C2orf68Q2NKX9 166 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 SPRR3Q9UBC9 169 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 C12orf54Q6X4T0 127 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 PUSL1Q8N0Z8 303 aaKnown RBP8.74□□□□□ -1.01
COL4A6-203ENST00000394872 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 BIVMQ86UB2 503 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
COL4A6-203ENST00000394872 NBR2O15453 112 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 TBR1Q16650 682 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 PSMG3Q9BT73 122 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-203ENST00000394872 E9PLN8 166 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 LYNX1G3V0Z9 82 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 CGAP01215 116 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 LYNX1P0DP58 116 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 TFF3Q07654 80 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 LDLRAD2Q5SZI1 272 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 VKORC1Q9BQB6 163 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 TMEM160Q9NX00 188 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 A0A1B0GV90 55 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 TMEM170BQ5T4T1 132 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 SLC25A34Q6PIV7 304 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 ARID2Q68CP9 1835 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 EGR1P18146 543 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 BEX4Q9NWD9 120 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-203ENST00000394872 CA7P43166 264 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 FHITP49789 147 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 GGACTQ9BVM4 153 aa8.73□□□□□ -1.01
COL4A6-203ENST00000394872 CD59P13987 128 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 RPRMQ9NS64 109 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 PQLC2LA1A4F0 135 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 DNAL4O96015 105 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 LEMD1Q68G75 181 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 ZCCHC24Q8N2G6 241 aaKnown RBP8.72□□□□□ -1.01
COL4A6-203ENST00000394872 RNASEH2CQ8TDP1 164 aaKnown RBP8.72□□□□□ -1.01
COL4A6-203ENST00000394872 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 GRIFINA4D1Z8 144 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 MYOD1P15172 320 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 OR52E5Q8NH55 327 aa8.72□□□□□ -1.01
COL4A6-203ENST00000394872 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
COL4A6-203ENST00000394872 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms