RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 EGR1P18146 543 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF273Q14593 569 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 IGHV3-35A0A0C4DH35 117 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 PSPNO60542 156 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 FAM106AQ4KMX7 169 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 H0YIZ8 118 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 WDR25Q64LD2 544 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-202ENST00000392770 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 GATAD1Q8WUU5 269 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 SGK494Q96LW2 274 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 TRGC2P03986 189 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 DUTP33316 252 aaKnown RBP13.8□□□□□ -0.2
SCN3B-202ENST00000392770 ELOBQ15370 118 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 FOXA2Q9Y261 457 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-202ENST00000392770 SELLP14151 372 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF474Q6S9Z5 364 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-202ENST00000392770 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 GLRX5Q86SX6 157 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 MAP1LC3CQ9BXW4 147 aa13.8□□□□□ -0.2
SCN3B-202ENST00000392770 TRGV3P03979 118 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 C2orf16Q68DN1 1984 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 RPL7P18124 248 aaKnown RBP13.79□□□□□ -0.2
SCN3B-202ENST00000392770 UNQ6494/PRO21346Q6UXR6 183 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 PGLYRP4Q96LB8 373 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 C7orf69Q9H7B7 122 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 C19orf35Q6ZS72 473 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 FBXL7Q9UJT9 491 aa13.79□□□□□ -0.2
SCN3B-202ENST00000392770 TMEM177Q53S58 311 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 C5orf24Q7Z6I8 188 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 PRSS1P07477 247 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 FREM3P0C091 2139 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 NPPCP23582 126 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 GNLYP22749 145 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 Q6P435 159 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 RNASEH2CQ8TDP1 164 aaKnown RBP13.78□□□□□ -0.2
SCN3B-202ENST00000392770 LOC389332A0A1B0GUA5 103 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 CGAP01215 116 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 ARID1AO14497 2285 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 TCAPO15273 167 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 AMY1AP04745 511 aa13.78□□□□□ -0.2
SCN3B-202ENST00000392770 NBR2O15453 112 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF672Q499Z4 452 aaPredicted RBP13.77□□□□□ -0.2
SCN3B-202ENST00000392770 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.2
SCN3B-202ENST00000392770 ST6GALNAC3Q8NDV1 305 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 IFT22Q9H7X7 185 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 TMEM178BH3BS89 294 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 AGAP20933 346 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.2
SCN3B-202ENST00000392770 SFRP2Q96HF1 295 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 WNT10AQ9GZT5 417 aa13.77□□□□□ -0.2
SCN3B-202ENST00000392770 EIF4E3Q8N5X7 224 aaKnown RBP13.77□□□□□ -0.21
SCN3B-202ENST00000392770 WFDC1Q9HC57 220 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 AUP1Q9Y679 476 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 ASXL3Q9C0F0 2248 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 NAPSAO96009 420 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 HAX1O00165 279 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 TMEM200BQ69YZ2 307 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 GOLT1AQ6ZVE7 132 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 LRTM2Q8N967 370 aa13.77□□□□□ -0.21
SCN3B-202ENST00000392770 AHCTF1Q8WYP5 2266 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 CD55P08174 381 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV3-66A0A0C4DH42 116 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 GATA2P23769 480 aaPredicted RBP13.76□□□□□ -0.21
SCN3B-202ENST00000392770 CENPWQ5EE01 88 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 MLNRO43193 412 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 IGKV3-15P01624 115 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 MAS1LP35410 378 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 MIR17HGQ75NE6 70 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 GSX1Q9H4S2 264 aaPredicted RBP13.76□□□□□ -0.21
SCN3B-202ENST00000392770 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 RBFOX2O43251 390 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCN3B-202ENST00000392770 CD24P25063 80 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 PRR30Q53SZ7 412 aaPredicted RBP13.76□□□□□ -0.21
SCN3B-202ENST00000392770 CLDND2Q8NHS1 167 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 SIAH2O43255 324 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 RAB9AP51151 201 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 DLX6P56179 175 aa13.76□□□□□ -0.21
SCN3B-202ENST00000392770 KIF26BQ2KJY2 2108 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 ID3Q02535 119 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 HSPB8Q9UJY1 196 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 CXorf65A6NEN9 183 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 TMEM191AQ9H0A3 160 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
SCN3B-202ENST00000392770 K7ENP7 123 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 GAFA1Q96PS6 74 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 SVILO95425 2214 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 DOCK8Q8NF50 2099 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV3OR16-13A0A075B7E8 117 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.75□□□□□ -0.21
SCN3B-202ENST00000392770 IGHV3-74A0A0B4J1X5 117 aa13.75□□□□□ -0.21
SCN3B-202ENST00000392770 RPL29P47914 159 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms