RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PNRC1Q12796 327 aaPredicted RBP10.35□□□□□ -0.75
VPS16-202ENST00000380445 HNF4GQ14541 408 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 EFNB3Q15768 340 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
VPS16-202ENST00000380445 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
VPS16-202ENST00000380445 TRAV3A0A0B4J244 114 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 IGKV1D-33P01593 117 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 IGKV1-33P01594 117 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 CA7P43166 264 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 PSMB3P49720 205 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 ZCCHC14Q8WYQ9 949 aaKnown RBP10.34□□□□□ -0.75
VPS16-202ENST00000380445 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 KAAG1Q9UBP8 84 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 LAMA5O15230 3695 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 TNFRSF13BO14836 293 aaPredicted RBP10.34□□□□□ -0.75
VPS16-202ENST00000380445 CT45A6P0DMU7 189 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 CT45A5P0DMU8 189 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 CT45A7P0DMV0 189 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 KLRB1Q12918 225 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 FBXL19-AS1Q494R0 122 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 TMEM200BQ69YZ2 307 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
VPS16-202ENST00000380445 MAP1BP46821 2468 aaKnown RBP10.34□□□□□ -0.75
VPS16-202ENST00000380445 RRHO14718 337 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
VPS16-202ENST00000380445 APOA2P02652 100 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 CHRNB4P30926 498 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
VPS16-202ENST00000380445 FAM90A2PQ658T7 463 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 ZNF833PQ6ZTB9 187 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 H1FXQ92522 213 aaKnown RBP10.33□□□□□ -0.76
VPS16-202ENST00000380445 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.33□□□□□ -0.76
VPS16-202ENST00000380445 M0R143 59 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 C8orf31Q8N9H6 132 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 ST6GALNAC3Q8NDV1 305 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 SLC24A4Q8NFF2 622 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 OSR1Q8TAX0 266 aaPredicted RBP10.33□□□□□ -0.76
VPS16-202ENST00000380445 NPVFQ9HCQ7 196 aa10.33□□□□□ -0.76
VPS16-202ENST00000380445 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 ZNF727A8MUV8 499 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 TRGC2P03986 189 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 CXCL1P09341 107 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 LINC00614P0C842 121 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 NPY1RP25929 384 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 OPRK1P41145 380 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 CDC34P49427 236 aaPredicted RBP10.32□□□□□ -0.76
VPS16-202ENST00000380445 ATP5IP56385 69 aaPredicted RBP10.32□□□□□ -0.76
VPS16-202ENST00000380445 MEF2BQ02080 365 aaPredicted RBP10.32□□□□□ -0.76
VPS16-202ENST00000380445 ETFRF1Q6IPR1 90 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 PRSS46E5RG02 174 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 IL6RP08887 468 aaPredicted RBP10.32□□□□□ -0.76
VPS16-202ENST00000380445 GZMBP10144 247 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 Q8WTZ3 238 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 RAB1CQ92928 201 aa10.32□□□□□ -0.76
VPS16-202ENST00000380445 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 UPK2O00526 184 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 DVL1O14640 695 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 CCL3L1P16619 93 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 GAGE1Q13065 139 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 ELOBQ15370 118 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 ZNF343Q6P1L6 599 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 TMEM186Q96B77 213 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 BET1LQ9NYM9 111 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 YLPM1P49750 1951 aaKnown RBP10.31□□□□□ -0.76
VPS16-202ENST00000380445 A0A1W2PPV4 95 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 ZNF705GA8MUZ8 300 aaPredicted RBP10.31□□□□□ -0.76
VPS16-202ENST00000380445 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 J3QR06 171 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 CCL21O00585 134 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 RAB31Q13636 194 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 CLEC2AQ6UVW9 174 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 LINC00311Q8N616 119 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 NEUROG1Q92886 237 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 NEIL1Q96FI4 390 aaPredicted RBP10.31□□□□□ -0.76
VPS16-202ENST00000380445 PLEKHA3Q9HB20 300 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 KBTBD11O94819 623 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 LYPD2Q6UXB3 125 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 Q8N7P7 452 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 OR10X1Q8NGY0 326 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
VPS16-202ENST00000380445 CACNA1AO00555 2505 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms