RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 KIR3DP1A8MWS1 328 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 AHRRA9YTQ3 701 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 RAMP3O60896 148 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PSG9Q00887 426 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PNKDQ8N490 385 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 ITLN1Q8WWA0 313 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM186Q96B77 213 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 COL4A3Q01955 1670 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 TRGV8A0A0C4DH27 118 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 OR2J3O76001 311 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 CD55P08174 381 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 HGFACQ04756 655 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 CHCHD1Q96BP2 118 aaKnown RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 RFNGQ9Y644 331 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 MDC1Q14676 2089 aaKnown RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PPIAL4EA0A075B759 164 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 C5orf63A6NC05 138 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PPIAL4DF5H284 164 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 TYMSP04818 313 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PPIAL4FP0DN26 164 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 NMUP48645 174 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 LHX2P50458 406 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PLP1P60201 277 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 OR4C13Q8NGP0 309 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 CCL13Q99616 98 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PPIAL4AQ9Y536 164 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 INSIG2Q9Y5U4 225 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 PFN1P07737 140 aaKnown RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 KIR2DL2P43627 348 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 Q6ZT83 130 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 GUCD1Q96NT3 240 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 SSBP3Q9BWW4 388 aaPredicted RBP7.35□□□□□ -1.23
PCDH9-202ENST00000377865 KIF26BQ2KJY2 2108 aa7.35□□□□□ -1.23
PCDH9-202ENST00000377865 NCBP2LA6PVI3 153 aaKnown RBP7.34□□□□□ -1.23
PCDH9-202ENST00000377865 WNT9BO14905 357 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 S100A4P26447 101 aaKnown RBP7.34□□□□□ -1.23
PCDH9-202ENST00000377865 NIT1Q86X76 327 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 FOXI3A8MTJ6 420 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-202ENST00000377865 IGLV3-1P01715 115 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 UQCRFS1P47985 274 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 HOXA4Q00056 320 aaPredicted RBP7.34□□□□□ -1.23
PCDH9-202ENST00000377865 SPEM2Q0P670 501 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 EFNB3Q15768 340 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 FBLN7Q53RD9 439 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 SAPCD1Q5SSQ6 148 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 Q6AWC8 147 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 GGNQ86UU5 652 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 PRR7Q8TB68 274 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 C20orf144Q9BQM9 153 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 SLC25A33Q9BSK2 321 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 TWIST1Q15672 202 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 LINC00305Q7Z4B0 112 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 FGFBP3Q8TAT2 258 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 FAM222BQ8WU58 562 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 MAP1LC3AQ9H492 121 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 TRAV30A0A087WSZ9 112 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 GOSR1O95249 250 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 C1orf185Q5T7R7 199 aa7.34□□□□□ -1.23
PCDH9-202ENST00000377865 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 ORM1P02763 201 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 OR9G9P0C7N8 305 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 COX7A1P24310 79 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 LGALS7P47929 136 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 CFHR1Q03591 330 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 TREML4Q6UXN2 200 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 ST20Q9HBF5 79 aa7.34□□□□□ -1.24
PCDH9-202ENST00000377865 A1L4Q6 167 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 ERASQ7Z444 233 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 MAFAQ8NHW3 353 aaPredicted RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 HES7Q9BYE0 225 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 A6NJY4 79 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 ATXN7O15265 892 aaPredicted RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 ORAOV1Q8WV07 137 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 GGTLC1Q9BX51 225 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 MRPL27Q9P0M9 148 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 RNF115Q9Y4L5 304 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 SPTBP11277 2137 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 KBTBD11-OT1A0A1B0GTJ5 212 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 UPK2O00526 184 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 EREGO14944 169 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 DUTP33316 252 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 CKS2P33552 79 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 RBPMS2Q6ZRY4 209 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 RAB1BQ9H0U4 201 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 A6NNC1 897 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 PPIHO43447 177 aaKnown RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 AREGP15514 252 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 Q0VG73 95 aa7.33□□□□□ -1.24
PCDH9-202ENST00000377865 FOXA2Q9Y261 457 aaPredicted RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 POLR3KQ9Y2Y1 108 aaPredicted RBP7.33□□□□□ -1.24
PCDH9-202ENST00000377865 E9PLN8 166 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 REG1BP48304 166 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 RPL30P62888 115 aaKnown RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 Q1RN00 199 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms