RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 POLR3KQ9Y2Y1 108 aaPredicted RBP14□□□□□ -0.17
UBE3D-203ENST00000369747 A0A1W2PPH5 198 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 HRASP01112 189 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 IGKV1-16P04430 117 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 IL6RP08887 468 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-203ENST00000369747 RAB2AP61019 212 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 HNF4GQ14541 408 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 ICAM4Q14773 271 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 ACSM6Q6P461 480 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 CIARTQ8N365 385 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-203ENST00000369747 OR13D1Q8NGV5 346 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 AIFM2Q9BRQ8 373 aa13.99□□□□□ -0.17
UBE3D-203ENST00000369747 HEYLQ9NQ87 328 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-203ENST00000369747 SCAF4O95104 1147 aaKnown RBP13.98□□□□□ -0.17
UBE3D-203ENST00000369747 IGKV1D-33P01593 117 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 IGKV1-33P01594 117 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 OR13C7P0DN81 318 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 ATF4P18848 351 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-203ENST00000369747 RTL8BQ17RB0 113 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 ZNF506Q5JVG8 444 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 ZNF596Q8TC21 504 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 TMEM170AQ8WVE7 144 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 CLCC1Q96S66 551 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
UBE3D-203ENST00000369747 SIRT7Q9NRC8 400 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 SRRM4A7MD48 611 aaKnown RBP13.98□□□□□ -0.17
UBE3D-203ENST00000369747 RRHO14718 337 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 IFNA10P01566 189 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 MSMBP08118 114 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 RPP30P78346 268 aaKnown RBP13.98□□□□□ -0.17
UBE3D-203ENST00000369747 LCN15Q6UWW0 184 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
UBE3D-203ENST00000369747 ACANP16112 2415 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 B4DSR2 109 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 PRSS46E5RG02 174 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 SRP19P09132 144 aaKnown RBP13.97□□□□□ -0.17
UBE3D-203ENST00000369747 HOXA1P49639 335 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-203ENST00000369747 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
UBE3D-203ENST00000369747 ABHD12Q8N2K0 398 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 RPP25LQ8N5L8 163 aaKnown RBP13.97□□□□□ -0.17
UBE3D-203ENST00000369747 C8orf31Q8N9H6 132 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 TLN2Q9Y4G6 2542 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 CSPG4Q6UVK1 2322 aa13.97□□□□□ -0.17
UBE3D-203ENST00000369747 J3QR06 171 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 MYOD1P15172 320 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-203ENST00000369747 TMEM249Q2WGJ8 235 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 C1orf159Q96HA4 380 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 INSIG2Q9Y5U4 225 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 ABCA1O95477 2261 aa13.96□□□□□ -0.17
UBE3D-203ENST00000369747 A0A087X0M5 115 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 A0A1B0GX30 115 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 M0R1W7 72 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 UPK2O00526 184 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 RBP4P02753 201 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 HSPB1P04792 205 aaKnown RBP13.96□□□□□ -0.18
UBE3D-203ENST00000369747 RXFP4Q8TDU9 374 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 SIRPDQ9H106 197 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 TMEM133Q9H2Q1 129 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.18
UBE3D-203ENST00000369747 LOC102723971A0A1B0GUV8 181 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 hCG_1809904A0A1W2PP81 198 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 A0A1W2PPE2 198 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 A0A1W2PR64 198 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 A0A1W2PRV1 198 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 H0YJW9 148 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 CD1BP29016 333 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 KHDC3LQ587J8 217 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 AWAT1Q58HT5 328 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 VMO1Q7Z5L0 202 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 KIR3DL3Q8N743 410 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 OR5AN1Q8NGI8 311 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 OR10X1Q8NGY0 326 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 PCGF1Q9BSM1 259 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 HIF1ANQ9NWT6 349 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 GNG13Q9P2W3 67 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 OR51B2Q9Y5P1 312 aa13.95□□□□□ -0.18
UBE3D-203ENST00000369747 MAP1LC3B2A6NCE7 125 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 EIF3GO75821 320 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBE3D-203ENST00000369747 FBP1P09467 338 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 COX7A1P24310 79 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 REG1BP48304 166 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 DIAPH2-AS1Q14236 149 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 FAM71F2Q6NXP2 309 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 LINC01356Q8N9X3 169 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 ST6GALNAC6Q969X2 333 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 MAP1LC3BQ9GZQ8 125 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 BET1LQ9NYM9 111 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 PRNDQ9UKY0 176 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 APOA2P02652 100 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 SAA1P0DJI8 122 aaPredicted RBP13.94□□□□□ -0.18
UBE3D-203ENST00000369747 IGHV4-31P0DP07 118 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 PRTN3P24158 256 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 PAX8Q06710 450 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 KLRD1Q13241 179 aa13.94□□□□□ -0.18
UBE3D-203ENST00000369747 AKIRIN2Q53H80 203 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms