RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CXorf66Q5JRM2 361 aaPredicted RBP7.05□□□□□ -1.28
SNX27-201ENST00000368838 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 TEX45Q8NA69 505 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 ZNF680Q8NEM1 530 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 LRRC20Q8TCA0 184 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 DCUN1D4Q92564 292 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 FLYWCH2Q96CP2 140 aaKnown RBP7.05□□□□□ -1.28
SNX27-201ENST00000368838 MALSU1Q96EH3 234 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 GPHA2Q96T91 129 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 PARD6GQ9BYG4 376 aaPredicted RBP7.05□□□□□ -1.28
SNX27-201ENST00000368838 MS4A7Q9GZW8 240 aaPredicted RBP7.05□□□□□ -1.28
SNX27-201ENST00000368838 ARL6Q9H0F7 186 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 PLSCR3Q9NRY6 295 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 PRNDQ9UKY0 176 aa7.05□□□□□ -1.28
SNX27-201ENST00000368838 PAIP2BQ9ULR5 123 aaKnown RBP7.05□□□□□ -1.28
SNX27-201ENST00000368838 TRAV40A0A0B4J280 105 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 CHST1O43916 411 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 SOX15O60248 233 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 ARG1P05089 322 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 MDKP21741 143 aaPredicted RBP7.04□□□□□ -1.28
SNX27-201ENST00000368838 G6PCP35575 357 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 GNG10P50151 68 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 DYNLT3P51808 116 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 UBE2KP61086 200 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 HSPE1P61604 102 aaKnown RBP7.04□□□□□ -1.28
SNX27-201ENST00000368838 POLR2GP62487 172 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNX27-201ENST00000368838 RPL23AP62750 156 aaKnown RBP7.04□□□□□ -1.28
SNX27-201ENST00000368838 FOXL1Q12952 345 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 AANATQ16613 207 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 LRRC37A5PQ49AS3 106 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 OR4A47Q6IF82 309 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 EIF5AL1Q6IS14 154 aaKnown RBP7.04□□□□□ -1.28
SNX27-201ENST00000368838 TMEM14EPQ6UXP3 125 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 LEAP2Q969E1 77 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 SRSF8Q9BRL6 282 aaKnown RBP7.04□□□□□ -1.28
SNX27-201ENST00000368838 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 CYTL1Q9NRR1 136 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
SNX27-201ENST00000368838 A0A1W2PPI3 338 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 MSGN1A6NI15 193 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 RNASEK-C17orf49H0YIS7 233 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 WRBO00258 174 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 UPK2O00526 184 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TSPAN9O75954 239 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 KBTBD11O94819 623 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TMEM50AO95807 157 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 CRYZL1O95825 349 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 CRYGBP07316 175 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 OR8U8P0C7N1 319 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 SULT1A1P50225 295 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 ARF6P62330 175 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 ZNF266Q14584 549 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 BSXQ3C1V8 233 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 CLLU1Q5K131 121 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 RUSC1-AS1Q66K80 236 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 HSD17B13Q7Z5P4 300 aaPredicted RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 OR8H1Q8NGG4 311 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 RNASE11Q8TAA1 199 aaKnown RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 SCARB1Q8WTV0 552 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 CFHR4Q92496 578 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 RPEQ96AT9 228 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TBX15Q96SF7 602 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 TSNAXQ99598 290 aaKnown RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 GGACTQ9BVM4 153 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 MRPL20Q9BYC9 149 aaKnown RBP7.03□□□□□ -1.28
SNX27-201ENST00000368838 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 MED9Q9NWA0 146 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 VWFP04275 2813 aa7.03□□□□□ -1.28
SNX27-201ENST00000368838 A0A1W2PPE3 182 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 MEX3AA1L020 520 aaKnown RBP7.02□□□□□ -1.28
SNX27-201ENST00000368838 HOXA3O43365 443 aaPredicted RBP7.02□□□□□ -1.28
SNX27-201ENST00000368838 DFFBO76075 338 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 NDUFA3O95167 84 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 IGKV1-16P04430 117 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 RNASE1P07998 156 aaKnown RBP7.02□□□□□ -1.28
SNX27-201ENST00000368838 SEC11BP0C7V7 166 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 LINC00205P59089 165 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 S100A10P60903 97 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 VAMP2P63027 116 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 RPP30P78346 268 aaKnown RBP7.02□□□□□ -1.28
SNX27-201ENST00000368838 PRCDQ00LT1 54 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 DEFB112Q30KQ8 113 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 PRR31Q5SQ13 230 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 PNKDQ8N490 385 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 NPBQ8NG41 125 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 ST8SIA2Q92186 375 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 SLC25A32Q9H2D1 315 aa7.02□□□□□ -1.28
SNX27-201ENST00000368838 ONECUT1Q9UBC0 465 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms