RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 EIF4E3Q8N5X7 224 aaKnown RBP10.86□□□□□ -0.67
CCDC197-201ENST00000359253 SLC24A4Q8NFF2 622 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
CCDC197-201ENST00000359253 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 UQCC1Q9NVA1 299 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 ITPR3Q14573 2671 aa10.86□□□□□ -0.67
CCDC197-201ENST00000359253 MAP1AP78559 2803 aaPredicted RBP10.85□□□□□ -0.67
CCDC197-201ENST00000359253 TRAV20A0A0B4J274 112 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
CCDC197-201ENST00000359253 TIMM23O14925 209 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 MPDU1O75352 247 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 ACTL6BO94805 426 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 VENTXO95231 258 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 MOSP00540 346 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 NPY1RP25929 384 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 BRS3P32247 399 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 DLK1P80370 383 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 EBI3Q14213 229 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 PRSS8Q16651 343 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 FAM74A1Q5RGS3 127 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 ETV3LQ6ZN32 361 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 HSD17B11Q8NBQ5 300 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 NPBQ8NG41 125 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 OR2G3Q8NGZ4 309 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 CFHR4Q92496 578 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 WDR61Q9GZS3 305 aaKnown RBP10.85□□□□□ -0.67
CCDC197-201ENST00000359253 KIAA1456Q9P272 454 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 SIGLEC9Q9Y336 463 aa10.85□□□□□ -0.67
CCDC197-201ENST00000359253 RAB19A4D1S5 217 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 SLC25A17O43808 307 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 MSMBP08118 114 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
CCDC197-201ENST00000359253 SNCAP37840 140 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 DLX1P56177 255 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 KLRD1Q13241 179 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 BSXQ3C1V8 233 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 COMMD1Q8N668 190 aa10.84□□□□□ -0.67
CCDC197-201ENST00000359253 TAF15Q92804 592 aaKnown RBP eCLIP10.84□□□□□ -0.67
CCDC197-201ENST00000359253 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
CCDC197-201ENST00000359253 IGHV3-72A0A0B4J1Y9 119 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 C17orf112F2Z3M2 114 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 RRHO14718 337 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 NDUFA3O95167 84 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 MBP02144 154 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 IFNA4P05014 189 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 FAM106CPP0CH98 169 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 AKR1C8PQ5T2L2 129 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 UQCC3Q6UW78 93 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 IL34Q6ZMJ4 242 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 LYPD6BQ8NI32 183 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 MARC2Q969Z3 335 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
CCDC197-201ENST00000359253 AKAP9Q99996 3911 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 TEX46H3BTG2 121 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 J3QLI3 93 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 NPFFO15130 113 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 NBR2O15453 112 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 PRH1P02810 166 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 MDKP21741 143 aaPredicted RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 GPX4P36969 197 aaPredicted RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 RPL27AP46776 148 aaKnown RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 BPIFB3P59826 476 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 SSX2Q16385 188 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 SPINK9Q5DT21 86 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 LDLRAD2Q5SZI1 272 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 ZNF709Q8N972 641 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 CACNG8Q8WXS5 425 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 KCNIP2Q9NS61 270 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
CCDC197-201ENST00000359253 FBXO7Q9Y3I1 522 aa10.82□□□□□ -0.68
CCDC197-201ENST00000359253 A0A096LNT2 108 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 BTBD17A6NE02 478 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 MFSD2BA6NFX1 497 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 RNF223E7ERA6 249 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 CA2P00918 260 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 IGKV1D-33P01593 117 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 IGKV1-33P01594 117 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 CAMLGP49069 296 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 RAB2AP61019 212 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 PRB3Q04118 309 aaPredicted RBP10.81□□□□□ -0.68
CCDC197-201ENST00000359253 RAB31Q13636 194 aa10.81□□□□□ -0.68
CCDC197-201ENST00000359253 PXDC1Q5TGL8 231 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms