RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RNF212Q495C1 297 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 NEIL1Q96FI4 390 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-202ENST00000359031 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 B4DEV8 164 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 PSMB3P49720 205 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 RAB13P51153 203 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 TNFRSF14Q92956 283 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 MGST2Q99735 147 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
GABPB1-202ENST00000359031 LSM4Q9Y4Z0 139 aaKnown RBP12.12□□□□□ -0.47
GABPB1-202ENST00000359031 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
GABPB1-202ENST00000359031 A0A1W2PPE2 198 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
GABPB1-202ENST00000359031 CA2P00918 260 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 MAS1LP35410 378 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM133Q9H2Q1 129 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 USP9XQ93008 2570 aaPredicted RBP12.11□□□□□ -0.47
GABPB1-202ENST00000359031 OR2C1O95371 312 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 USF1P22415 310 aaPredicted RBP12.11□□□□□ -0.47
GABPB1-202ENST00000359031 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 SIRT7Q9NRC8 400 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
GABPB1-202ENST00000359031 PCNX1Q96RV3 2341 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 RBP4P02753 201 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 MYOD1P15172 320 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 CD81P60033 236 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 RAB5BP61020 215 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 RAB31Q13636 194 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 CDSNQ15517 529 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
GABPB1-202ENST00000359031 TEPPQ6URK8 271 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 TGIF2LXQ8IUE1 241 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 OR1L8Q8NGR8 309 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
GABPB1-202ENST00000359031 UNC79Q9P2D8 2635 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 A0A1W2PPV4 95 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
GABPB1-202ENST00000359031 YIF1AO95070 293 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 COL8A2P25067 703 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 MC5RP33032 325 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 REG1BP48304 166 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 RPL8P62917 257 aaKnown RBP12.09□□□□□ -0.47
GABPB1-202ENST00000359031 BSXQ3C1V8 233 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 MALSU1Q96EH3 234 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 NBPF19A0A087WUL8 3843 aa12.09□□□□□ -0.47
GABPB1-202ENST00000359031 C1orf196B1AJZ1 125 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
GABPB1-202ENST00000359031 RNF224P0DH78 156 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 RAB5AP20339 215 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 ZNF841Q6ZN19 808 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 C11orf42Q8N5U0 333 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 C8orf46Q8TAG6 207 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 COMMD5Q9GZQ3 224 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 A0A1W2PN81 502 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 ZNF727A8MUV8 499 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 COL8A1P27658 744 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 CHRNA7P36544 502 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
GABPB1-202ENST00000359031 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.48
GABPB1-202ENST00000359031 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 IQCF2Q8IXL9 164 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 FAM24BQ8N5W8 94 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 BIN3Q9NQY0 253 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 CBLN4Q9NTU7 201 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 NAT8Q9UHE5 227 aa12.08□□□□□ -0.48
GABPB1-202ENST00000359031 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
GABPB1-202ENST00000359031 POLEQ07864 2286 aa12.07□□□□□ -0.48
GABPB1-202ENST00000359031 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
GABPB1-202ENST00000359031 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms