RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 IGKV1D-42A0A075B6H8 117 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 HIKESHIQ53FT3 197 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 WFDC5Q8TCV5 224 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 MRPL32Q9BYC8 188 aaKnown RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 BTAF1O14981 1849 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 HSD52Q0P140 79 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 ZNF729A6NN14 1252 aaPredicted RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 SCTP09683 121 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 INO80CQ6PI98 192 aaPredicted RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 KLHDC9Q8NEP7 349 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 RIF1Q5UIP0 2472 aaKnown RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TNRC6AQ8NDV7 1962 aaKnown RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 C9JAW5 83 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 OVOL2Q9BRP0 275 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM126AQ9H061 195 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TRBV5-4A0A0C4DH59 114 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 MLNRO43193 412 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 PSG1P11464 419 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM91Q6ZNR0 172 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
SCN8A-201ENST00000354534 USP54Q70EL1 1684 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 IGHV3OR16-10A0A075B7F0 116 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM171Q8WVE6 324 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 SERF1AO75920 110 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 TCRAP04437 139 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 FBXW9Q5XUX1 488 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 FGFRL1Q8N441 504 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 CNRIP1Q96F85 164 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 LINC00615Q96LM1 132 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 C19orf24Q9BVV8 132 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 LSM4Q9Y4Z0 139 aaKnown RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 LRRK1Q38SD2 2015 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 STHQ8IWL8 128 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 ABHD12Q8N2K0 398 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 CGAP01215 116 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 PCMT1P22061 227 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 KLHDC2Q9Y2U9 406 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 ZG16O60844 167 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 CCL13Q99616 98 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM30AQ9NV96 361 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 LEPROTO15243 131 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 CD300EQ496F6 205 aaPredicted RBP6.88□□□□□ -1.31
SCN8A-201ENST00000354534 DTX2Q86UW9 622 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 NDUFAF3Q9BU61 184 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 PSG3Q16557 428 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 C17orf99Q6UX52 265 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 PSCAO43653 123 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 GCHFRP30047 84 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 SCRT1Q9BWW7 348 aa6.88□□□□□ -1.31
SCN8A-201ENST00000354534 PDCD11Q14690 1871 aaKnown RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 A0A0G2JMM0 328 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 A0A1W2PPB8 328 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 KIR3DP1A8MWS1 328 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 GLULP15104 373 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 SPRED2Q7Z698 418 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 PDFQ9HBH1 243 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 WNK1Q9H4A3 2382 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 LOC105371242A0A075B767 164 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 PPIAL4CA0A0B4J2A2 164 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 DANCRP0C864 163 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 PPIAL4GP0DN37 164 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 LSM6P62312 80 aaKnown RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 CYP2G1PQ6ZSU1 146 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 TRGV4A0A0C4DH28 118 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 TCRBV5S1A1TA0A578 114 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 IZUMO1RA6ND01 250 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 LMO7DNF2Z398 122 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 ZNF79Q15937 498 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 HOGA1Q86XE5 327 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 NEUROG3Q9Y4Z2 214 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 UBE2DNLQ8IWF7 75 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 A8MXK9 166 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 CEACAM5P06731 702 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 RASL11AQ6T310 242 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 TEX45Q8NA69 505 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 OR5P3Q8WZ94 311 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms