RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 A1L4Q6 167 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 MBD3L4A6NDZ8 208 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 MBD3L3A6NE82 208 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 MBD3L5A6NJ08 208 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 QRFPP83859 136 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 MBD3L2Q8NHZ7 208 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 PRO1933Q9H354 126 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 FAM208BQ5VWN6 2430 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 TRGC2P03986 189 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 GCHFRP30047 84 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 HOXA4Q00056 320 aaPredicted RBP13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 PLA2G2CQ5R387 149 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 E9PQ18 207 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 SELLP14151 372 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 CCKARP32238 428 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 WDFY1Q8IWB7 410 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
CARMIL3-201ENST00000342740 TMEM250H0YL14 139 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 NAPSAO96009 420 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 APCSP02743 223 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 SUPT4H1P63272 117 aaKnown RBP13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 TFF3Q07654 80 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 PRB3Q04118 309 aaPredicted RBP13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 IGKV1D-33P01593 117 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 BIVMQ86UB2 503 aa13.04□□□□□ -0.32
CARMIL3-201ENST00000342740 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 IGFBP2P18065 325 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 SGK494Q96LW2 274 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 IL4P05112 153 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 TMEM183BQ1AE95 376 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 LRTM2Q8N967 370 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 WFIKKN1Q96NZ8 548 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 CBLN4Q9NTU7 201 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 DUTP33316 252 aaKnown RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 WDR25Q64LD2 544 aaPredicted RBP13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 CYP2G1PQ6ZSU1 146 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 A0A1W2PS18 150 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 ID1P41134 155 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 TFPI2P48307 235 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
CARMIL3-201ENST00000342740 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.32
CARMIL3-201ENST00000342740 SRSF7Q16629 238 aaKnown RBP eCLIP13.02□□□□□ -0.32
CARMIL3-201ENST00000342740 IFT22Q9H7X7 185 aa13.02□□□□□ -0.32
CARMIL3-201ENST00000342740 AGAP20933 346 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM133Q9H2Q1 129 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 ACACBO00763 2458 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 GTF3C1Q12789 2109 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 A8MXK9 166 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 RBFOX2O43251 390 aaKnown RBP eCLIP13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 FAM168AQ92567 244 aa13.02□□□□□ -0.33
CARMIL3-201ENST00000342740 PRSS1P07477 247 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 A0A0G2JNJ9 132 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 Q9UFV3 132 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 CGB1A6NKQ9 187 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 UPK2O00526 184 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 RPL29P47914 159 aaKnown RBP13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 ELOBQ15370 118 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 SPANXN1Q5VSR9 72 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 ZNF343Q6P1L6 599 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 ZNF474Q6S9Z5 364 aaPredicted RBP13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 C5orf24Q7Z6I8 188 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 DOCK10Q96BY6 2186 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 CACNG8Q8WXS5 425 aa13.01□□□□□ -0.33
CARMIL3-201ENST00000342740 MT-ND6P03923 174 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 CD55P08174 381 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 ATP5G2Q06055 141 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 RBPMS2Q6ZRY4 209 aaKnown RBP13□□□□□ -0.33
CARMIL3-201ENST00000342740 S4R3C0 116 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM189A5PLL7 270 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 LRRK1Q38SD2 2015 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 TGIF2-C20orf24A0A0A6YYL0 155 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 TRAV34A0A0B4J273 112 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 SMIM6P0DI80 62 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 GLRX5Q86SX6 157 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 RPUSD1Q9UJJ7 312 aaKnown RBP13□□□□□ -0.33
CARMIL3-201ENST00000342740 ZGRF1Q86YA3 2104 aa13□□□□□ -0.33
CARMIL3-201ENST00000342740 SPG11Q96JI7 2443 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 GATA2P23769 480 aaPredicted RBP12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 ZNF738Q8NE65 137 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms