RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 RNASEH2CQ8TDP1 164 aaKnown RBP12.84□□□□□ -0.35
COL11A2-201ENST00000341947 WDYHV1Q96HA8 205 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 PCM1Q15154 2024 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 IQCF6A8MYZ5 107 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 C17orf98A8MV24 154 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 CGAP01215 116 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 H2BFSP57053 126 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 VENTXO95231 258 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 SMIM13P0DJ93 91 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 WNT10AQ9GZT5 417 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.35
COL11A2-201ENST00000341947 HOXA5P20719 270 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 MRPS18CQ9Y3D5 142 aaKnown RBP12.83□□□□□ -0.36
COL11A2-201ENST00000341947 TDRD15B5MCY1 1934 aaKnown RBP12.83□□□□□ -0.36
COL11A2-201ENST00000341947 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 SIGLEC5O15389 551 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 ATP5LO75964 103 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
COL11A2-201ENST00000341947 MALP21145 153 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 ZNF506Q5JVG8 444 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 NBR2O15453 112 aa12.83□□□□□ -0.36
COL11A2-201ENST00000341947 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
COL11A2-201ENST00000341947 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
COL11A2-201ENST00000341947 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
COL11A2-201ENST00000341947 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
COL11A2-201ENST00000341947 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 CNTFRP26992 372 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 TFF3Q07654 80 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 PSG7Q13046 419 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 TBR1Q16650 682 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 JKAMPQ9P055 326 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 EGR1P18146 543 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 LINC00469Q8N7U9 141 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 METRNQ9UJH8 293 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 C1QL2Q7Z5L3 287 aa12.82□□□□□ -0.36
COL11A2-201ENST00000341947 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
COL11A2-201ENST00000341947 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 FHITP49789 147 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 TMEM167AQ8TBQ9 72 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 A0A1B0GW15 77 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 TCF23Q7RTU1 214 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 PARD6GQ9BYG4 376 aaPredicted RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 TRIP12Q14669 1992 aaPredicted RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 MSGN1A6NI15 193 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 CACNG8Q8WXS5 425 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
COL11A2-201ENST00000341947 IL36BQ9NZH7 164 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 THBDP07204 575 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 CELA3BP08861 270 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 CBLN1P23435 193 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
COL11A2-201ENST00000341947 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
COL11A2-201ENST00000341947 BRWD1Q9NSI6 2320 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 RCC1LQ96I51 464 aaKnown RBP12.8□□□□□ -0.36
COL11A2-201ENST00000341947 Q9H3A6 140 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 SOX21Q9Y651 276 aaPredicted RBP12.8□□□□□ -0.36
COL11A2-201ENST00000341947 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 Q6AWC8 147 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 KCNS1Q96KK3 526 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 LEMD1Q68G75 181 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 BEND2Q8NDZ0 799 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 DMRTA2Q96SC8 542 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 FOXC2Q99958 501 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 IGKV1D-43A0A0B4J1Z2 117 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
COL11A2-201ENST00000341947 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
COL11A2-201ENST00000341947 TMEM105Q8N8V8 129 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 IMMP1LQ96LU5 166 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 REPIN1Q9BWE0 567 aaKnown RBP12.79□□□□□ -0.36
COL11A2-201ENST00000341947 AICDAQ9GZX7 198 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 A0A0G2JK05 382 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 TMEM42Q69YG0 159 aa12.79□□□□□ -0.36
COL11A2-201ENST00000341947 SCO2A0A1W2PP80 73 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms