RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 CD40P25942 277 aa10□□□□□ -0.81
CDH5-201ENST00000341529 KIR2DL2P43627 348 aaPredicted RBP10□□□□□ -0.81
CDH5-201ENST00000341529 VAMP3Q15836 100 aa10□□□□□ -0.81
CDH5-201ENST00000341529 MUC21Q5SSG8 566 aa10□□□□□ -0.81
CDH5-201ENST00000341529 ZNF497Q6ZNH5 498 aa10□□□□□ -0.81
CDH5-201ENST00000341529 TCF23Q7RTU1 214 aa10□□□□□ -0.81
CDH5-201ENST00000341529 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
CDH5-201ENST00000341529 RAB1BQ9H0U4 201 aa10□□□□□ -0.81
CDH5-201ENST00000341529 SMDT1Q9H4I9 107 aa10□□□□□ -0.81
CDH5-201ENST00000341529 METTL1Q9UBP6 276 aaKnown RBP10□□□□□ -0.81
CDH5-201ENST00000341529 JPT1Q9UK76 154 aa10□□□□□ -0.81
CDH5-201ENST00000341529 OR9G9P0C7N8 305 aa10□□□□□ -0.81
CDH5-201ENST00000341529 BSPH1Q075Z2 132 aa10□□□□□ -0.81
CDH5-201ENST00000341529 MUC15Q8N387 334 aa10□□□□□ -0.81
CDH5-201ENST00000341529 RNF2Q99496 336 aa10□□□□□ -0.81
CDH5-201ENST00000341529 USP9YO00507 2555 aaPredicted RBP10□□□□□ -0.81
CDH5-201ENST00000341529 SZT2Q5T011 3432 aa10□□□□□ -0.81
CDH5-201ENST00000341529 TRAV3A0A0B4J244 114 aa10□□□□□ -0.81
CDH5-201ENST00000341529 M0R2Z0 102 aa10□□□□□ -0.81
CDH5-201ENST00000341529 HIST1H1BP16401 226 aaKnown RBP10□□□□□ -0.81
CDH5-201ENST00000341529 ARL16Q0P5N6 197 aa10□□□□□ -0.81
CDH5-201ENST00000341529 PCSK4Q6UW60 755 aa10□□□□□ -0.81
CDH5-201ENST00000341529 FA2HQ7L5A8 372 aa10□□□□□ -0.81
CDH5-201ENST00000341529 OR8B3Q8NGG8 313 aa10□□□□□ -0.81
CDH5-201ENST00000341529 LILRB1Q8NHL6 650 aaPredicted RBP10□□□□□ -0.81
CDH5-201ENST00000341529 OR8B2Q96RD0 313 aa10□□□□□ -0.81
CDH5-201ENST00000341529 IGKV3D-15A0A087WSY6 115 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 ELOA3CA0A087WX78 387 aaPredicted RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 IGHV3-49A0A0A0MS15 119 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 IGHV1-18A0A0C4DH31 117 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 FAM90A26D6RGX4 464 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 P01737 135 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 ZNF883P0CG24 379 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 DTX1Q86Y01 620 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 IL6RP08887 468 aaPredicted RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 CXCL1P09341 107 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 TMEM42Q69YG0 159 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 OR1P1Q8NH06 330 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 COLCA2A8K830 154 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 CD5P06127 495 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 TIMM23BQ5SRD1 257 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 IBA57Q5T440 356 aaKnown RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
CDH5-201ENST00000341529 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 MRPL20Q9BYC9 149 aaKnown RBP9.99□□□□□ -0.81
CDH5-201ENST00000341529 IGHV3-23P01764 117 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 GCHFRP30047 84 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 MST1LQ2TV78 715 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 FBXL15Q9H469 300 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 SAA2-SAA4A0A096LPE2 208 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 SAA2P0DJI9 122 aaPredicted RBP9.98□□□□□ -0.81
CDH5-201ENST00000341529 NMSQ5H8A3 153 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 ETFRF1Q6IPR1 90 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 Q6ZN92 141 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 GCSAMQ8N6F7 178 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 OR10W1Q8NGF6 305 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 NRN1LQ496H8 165 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 PNKDQ8N490 385 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 STARD4Q96DR4 205 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 NDFIP1Q9BT67 221 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 ZDHHC8Q9ULC8 765 aa9.98□□□□□ -0.81
CDH5-201ENST00000341529 BMPR1BO00238 502 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 MLNRO43193 412 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 HYPMO75409 117 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 ORM1P02763 201 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 DERL1Q9BUN8 251 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 CBLN4Q9NTU7 201 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 LINC00473A8K010 186 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 DLX1P56177 255 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 PSMG3Q9BT73 122 aaPredicted RBP9.97□□□□□ -0.81
CDH5-201ENST00000341529 MRPL18Q9H0U6 180 aaKnown RBP9.97□□□□□ -0.81
CDH5-201ENST00000341529 DCAF16Q9NXF7 216 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 CD33P20138 364 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
CDH5-201ENST00000341529 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 LY6HO94772 140 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 SRIP30626 198 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
CDH5-201ENST00000341529 MORN2Q502X0 79 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 MMD2Q8IY49 270 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 NEU1Q99519 415 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 GSN-AS1Q9NRJ2 163 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 UFC1Q9Y3C8 167 aa9.97□□□□□ -0.81
CDH5-201ENST00000341529 AMMECR1Q9Y4X0 333 aaPredicted RBP9.97□□□□□ -0.81
CDH5-201ENST00000341529 PPIAL4CA0A0B4J2A2 164 aa9.96□□□□□ -0.81
CDH5-201ENST00000341529 RNF224P0DH78 156 aa9.96□□□□□ -0.81
CDH5-201ENST00000341529 PPIAL4GP0DN37 164 aa9.96□□□□□ -0.81
CDH5-201ENST00000341529 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.81
CDH5-201ENST00000341529 HTN1P15515 57 aa9.96□□□□□ -0.81
CDH5-201ENST00000341529 PAX6P26367 422 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms