RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 HIST2H2BEQ16778 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.25□□□□□ -0.45
TPM3-208ENST00000341485 SLC25A48Q6ZT89 311 aaKnown RBP12.25□□□□□ -0.45
TPM3-208ENST00000341485 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BHQ93079 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BNQ99877 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 HIST1H2BMQ99879 126 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 PXMP4Q9Y6I8 212 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 NBEAQ8NFP9 2946 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 TRBV24-1A0A075B6N3 115 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 IGHV1-69-2A0A0G2JMI3 117 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 C19orf84I3L1E1 186 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 NDUFB7P17568 137 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 PPOXP50336 477 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 ARSJQ5FYB0 599 aaPredicted RBP12.25□□□□□ -0.45
TPM3-208ENST00000341485 SPNS3Q6ZMD2 512 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 CBLN4Q9NTU7 201 aa12.25□□□□□ -0.45
TPM3-208ENST00000341485 LSM4Q9Y4Z0 139 aaKnown RBP12.25□□□□□ -0.45
TPM3-208ENST00000341485 A0A1W2PPV4 95 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 hADV38S2A0JD32 116 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 IFITM10A6NMD0 228 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 TMPRSS2O15393 492 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 NPY1RP25929 384 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 SLC24A4Q8NFF2 622 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 LINC00312Q9Y6C7 94 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 HIVEP3Q5T1R4 2406 aa12.24□□□□□ -0.45
TPM3-208ENST00000341485 FCN3O75636 299 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 CA2P00918 260 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 HRASP01112 189 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
TPM3-208ENST00000341485 IL6RP08887 468 aaPredicted RBP12.23□□□□□ -0.45
TPM3-208ENST00000341485 ATP5G3P48201 142 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 UBE2G2P60604 165 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 ABHD5Q8WTS1 349 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 NPVFQ9HCQ7 196 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 OR51B2Q9Y5P1 312 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 SRRM4A7MD48 611 aaKnown RBP12.23□□□□□ -0.45
TPM3-208ENST00000341485 PHOX2AO14813 284 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 IGKV1-16P04430 117 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 CDX1P47902 265 aaPredicted RBP12.23□□□□□ -0.45
TPM3-208ENST00000341485 S100A12P80511 92 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 FRZBQ92765 325 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 RAB1BQ9H0U4 201 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 ENY2Q9NPA8 101 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
TPM3-208ENST00000341485 SLC25A10Q9UBX3 287 aaPredicted RBP12.23□□□□□ -0.45
TPM3-208ENST00000341485 UPK2O00526 184 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 ZNF843Q8N446 348 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 HINT2Q9BX68 163 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 TGOLN2O43493 480 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 STAG3L2P0CL84 134 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 GNB1P62873 340 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 OR51G1Q8NGK1 321 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
TPM3-208ENST00000341485 ARFGEF3Q5TH69 2177 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 H7BYZ3 331 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 CCL3L1P16619 93 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 B2MP61769 119 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 RPL31P62899 125 aaKnown RBP12.21□□□□□ -0.45
TPM3-208ENST00000341485 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 KCNIP2Q9NS61 270 aa12.21□□□□□ -0.45
TPM3-208ENST00000341485 ROS1P08922 2347 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 J3QR06 171 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 PDE6DO43924 150 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 GALR1P47211 349 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
TPM3-208ENST00000341485 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 ZNF833PQ6ZTB9 187 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 OR10A7Q8NGE5 316 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 MRPL20Q9BYC9 149 aaKnown RBP12.2□□□□□ -0.46
TPM3-208ENST00000341485 GAL3ST2Q9H3Q3 398 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 UBTD1Q9HAC8 227 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 ZNF257Q9Y2Q1 563 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 RELNP78509 3460 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 VENTXO95231 258 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 SOD3P08294 240 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 PRCDQ00LT1 54 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 GFI1BQ5VTD9 330 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 SPATA31B1PQ5VZV4 182 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 C11orf71Q6IPW1 123 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 STPG3Q8N7X2 389 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 PLEKHA3Q9HB20 300 aa12.2□□□□□ -0.46
TPM3-208ENST00000341485 ANKHD1Q8IWZ3 2542 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms