RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SUB1P53999 127 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■■■□□ 16.6
HPS1-202ENST00000338546 SRSF3P84103 164 aaKnown RBP13.09□□□□□ -0.31
HPS1-202ENST00000338546 PSG5Q15238 335 aa13.09□□□□□ -0.31
HPS1-202ENST00000338546 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
HPS1-202ENST00000338546 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
HPS1-202ENST00000338546 APOC3P02656 99 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 MYOD1P15172 320 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
HPS1-202ENST00000338546 OPRK1P41145 380 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 DLX1P56177 255 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 RAB31Q13636 194 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 PRSS8Q16651 343 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 VMO1Q7Z5L0 202 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 FAM168AQ92567 244 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 TBL2Q9Y4P3 447 aaKnown RBP13.08□□□□□ -0.32
HPS1-202ENST00000338546 LSM4Q9Y4Z0 139 aaKnown RBP13.08□□□□□ -0.32
HPS1-202ENST00000338546 LRBAP50851 2863 aa13.08□□□□□ -0.32
HPS1-202ENST00000338546 FAM157AC9JC47 383 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 F8W036 122 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 RNASE2P10153 161 aaKnown RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 DSCR9P59020 149 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 SVBPQ8N300 66 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 SIGLEC9Q9Y336 463 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 IGHV3-72A0A0B4J1Y9 119 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 RBFOX3A6NFN3 312 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 VWC2LB2RUY7 222 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 CYB5BO43169 146 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 COX6B1P14854 86 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 MRGPRG-AS1Q2M3A8 158 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 CLEC2AQ6UVW9 174 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 RNASEH2CQ8TDP1 164 aaKnown RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 CFHR4Q92496 578 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 RCC1LQ96I51 464 aaKnown RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 RITA1Q96K30 269 aa13.07□□□□□ -0.32
HPS1-202ENST00000338546 SRSF8Q9BRL6 282 aaKnown RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 EIF5A2Q9GZV4 153 aaKnown RBP13.07□□□□□ -0.32
HPS1-202ENST00000338546 CTXND1A0A1B0GTU2 59 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 TIMM23O14925 209 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 TSPAN9O75954 239 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 ACTL6BO94805 426 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 VENTXO95231 258 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 OPN1MWP04001 364 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 OPN1MW2P0DN77 364 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 OPN1MW3P0DN78 364 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
HPS1-202ENST00000338546 M6PRP20645 277 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 COMPP49747 757 aaPredicted RBP13.06□□□□□ -0.32
HPS1-202ENST00000338546 UBE2E1P51965 193 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 LCN2P80188 198 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 ACSM6Q6P461 480 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 PPP1R27Q86WC6 154 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 ACTR3CQ9C0K3 210 aaPredicted RBP13.06□□□□□ -0.32
HPS1-202ENST00000338546 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
HPS1-202ENST00000338546 USP9XQ93008 2570 aaPredicted RBP13.06□□□□□ -0.32
HPS1-202ENST00000338546 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 CGB1A6NKQ9 187 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 NDUFS6O75380 124 aaKnown RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 TOX4O94842 621 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 ADCYAP1P18509 176 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 ATP5J2P56134 94 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 LGALS4P56470 323 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 NPBQ8NG41 125 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 OR10G4Q8NGN3 311 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 OR10G9Q8NGN4 311 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 OR10G7Q8NGN6 311 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
HPS1-202ENST00000338546 METTL1Q9UBP6 276 aaKnown RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 SPTAN1Q13813 2472 aaKnown RBP13.05□□□□□ -0.32
HPS1-202ENST00000338546 SEC14L6B5MCN3 397 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 MOSP00540 346 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 RPL27AP46776 148 aaKnown RBP13.04□□□□□ -0.32
HPS1-202ENST00000338546 CCL20P78556 96 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 PRB3Q04118 309 aaPredicted RBP13.04□□□□□ -0.32
HPS1-202ENST00000338546 CD69Q07108 199 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 SRSF1Q07955 248 aaKnown RBP eCLIP13.04□□□□□ -0.32
HPS1-202ENST00000338546 KLRD1Q13241 179 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
HPS1-202ENST00000338546 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms