RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DUS4LO95620 317 aaKnown RBP13.11□□□□□ -0.31
SHOX-201ENST00000334060 CRYGBP07316 175 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 APELAP0DMC3 54 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 BRS3P32247 399 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 MC5RP33032 325 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 FAM209BQ5JX69 171 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 IL34Q6ZMJ4 242 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 FBXO7Q9Y3I1 522 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 SPDEFO95238 335 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 FAM106CPP0CH98 169 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 C11orf88Q6PI97 169 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 C19orf35Q6ZS72 473 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 RBM14Q96PK6 669 aaKnown RBP13.11□□□□□ -0.31
SHOX-201ENST00000334060 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
SHOX-201ENST00000334060 PLEKHA2Q9HB19 425 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 METTL1Q9UBP6 276 aaKnown RBP13.11□□□□□ -0.31
SHOX-201ENST00000334060 LINC00527Q9UJ94 153 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 C2CD3Q4AC94 2353 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 GOSR2O14653 212 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 NBR2O15453 112 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.31
SHOX-201ENST00000334060 S100GP29377 79 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 H2BFSP57053 126 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 RELBQ01201 579 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 SSMEM1Q8WWF3 244 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 ZNF430Q9H8G1 570 aaPredicted RBP13.1□□□□□ -0.31
SHOX-201ENST00000334060 KCNIP3Q9Y2W7 256 aa13.1□□□□□ -0.31
SHOX-201ENST00000334060 FGF16O43320 207 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 NDUFA3O95167 84 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 AKR1C2P52895 323 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
SHOX-201ENST00000334060 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 RRHO14718 337 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 NQO2P16083 231 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 HLA-GP17693 338 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 THNSL2Q86YJ6 484 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 C15orf54Q8N8G6 183 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 STOML3Q8TAV4 291 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 OSR1Q8TAX0 266 aaPredicted RBP13.09□□□□□ -0.31
SHOX-201ENST00000334060 TNFSF18Q9UNG2 199 aa13.09□□□□□ -0.31
SHOX-201ENST00000334060 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 UBE2CO00762 179 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 GPR137BO60478 399 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 CA2P00918 260 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 IL6RP08887 468 aaPredicted RBP13.08□□□□□ -0.32
SHOX-201ENST00000334060 HILS1P60008 231 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 GNB1P62873 340 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 LGI3Q8N145 548 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 NPBQ8NG41 125 aa13.08□□□□□ -0.32
SHOX-201ENST00000334060 QTRT1Q9BXR0 403 aaKnown RBP13.08□□□□□ -0.32
SHOX-201ENST00000334060 KBTBD11O94819 623 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 C5orf64Q2M2E5 130 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 CACNG5Q9UF02 275 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 C1orf196B1AJZ1 125 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 UBE2KP61086 200 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 RNF141Q8WVD5 230 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 PHB2Q99623 299 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 POMT1Q9Y6A1 747 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 ATRQ13535 2644 aa13.07□□□□□ -0.32
SHOX-201ENST00000334060 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHOX-201ENST00000334060 ARHGDIBP52566 201 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 SMCO1Q147U7 214 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 PLGLAQ15195 96 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 SHPKQ9UHJ6 478 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
SHOX-201ENST00000334060 TENM1Q9UKZ4 2725 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 UPK2O00526 184 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 EIF5AP63241 154 aaKnown RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 PEA15Q15121 130 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 POU2AF1Q16633 256 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 C10orf99Q6UWK7 81 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 H2BFWTQ7Z2G1 175 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 TEX29Q8N6K0 151 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms