RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TSKUQ8WUA8 353 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 OR2D2Q9H210 308 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
PKP3-201ENST00000331563 DMXL2Q8TDJ6 3036 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 C5orf49A4QMS7 147 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 IGLL1P15814 213 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 CA6P23280 308 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 RAB1CQ92928 201 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 SPSB4Q96A44 273 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 C1QTNF5Q9BXJ0 243 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 SVILO95425 2214 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 AKAP13Q12802 2813 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 PINLYPA6NC86 204 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 RRHO14718 337 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 GNG7O60262 68 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 KRTAP27-1Q3LI81 207 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 ST6GALNAC6Q969X2 333 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 EAF1Q96JC9 268 aaPredicted RBP15.1■□□□□ 0.01
PKP3-201ENST00000331563 SERTAD4Q9NUC0 356 aa15.1■□□□□ 0.01
PKP3-201ENST00000331563 C22orf46C9J442 243 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 J3QR06 171 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 ATP1A1-AS1Q5TC04 95 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 MIC13Q5XKP0 118 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 OR4P4Q8NGL7 312 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 WDR83OSQ9Y284 106 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 CACNA1DQ01668 2161 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 TRBV6-6A0A0A6YYG2 114 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 A0A1B0GV72 72 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 TMEM136Q6ZRR5 245 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 DOLPP1Q86YN1 238 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 RNASE7Q9H1E1 156 aaKnown RBP15.09■□□□□ 0.01
PKP3-201ENST00000331563 CLEC5AQ9NY25 188 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 V9GYV3 84 aa15.09■□□□□ 0.01
PKP3-201ENST00000331563 A0A096LPE4 126 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 A0A1W2PPZ6 126 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 HSBP1O75506 76 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 NUDT3O95989 172 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 MT-CO3P00414 261 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 ZNF883P0CG24 379 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 DSCR4P56555 118 aaPredicted RBP15.08■□□□□ 0.01
PKP3-201ENST00000331563 VWC2Q2TAL6 325 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 WIPI1Q5MNZ9 446 aaPredicted RBP15.08■□□□□ 0.01
PKP3-201ENST00000331563 BVES-AS1Q5T3Y7 98 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 HES3Q5TGS1 186 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 ZNF439Q8NDP4 499 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 OR1N2Q8NGR9 330 aa15.08■□□□□ 0.01
PKP3-201ENST00000331563 ATMQ13315 3056 aa15.08■□□□□ 0
PKP3-201ENST00000331563 P04436 131 aa15.08■□□□□ 0
PKP3-201ENST00000331563 IGLC1P0CG04 106 aa15.08■□□□□ 0
PKP3-201ENST00000331563 GNG4P50150 75 aa15.08■□□□□ 0
PKP3-201ENST00000331563 RPL30P62888 115 aaKnown RBP15.08■□□□□ 0
PKP3-201ENST00000331563 SCGB2A2Q13296 93 aa15.08■□□□□ 0
PKP3-201ENST00000331563 TRIP6Q15654 476 aaKnown RBP15.08■□□□□ 0
PKP3-201ENST00000331563 LINC00696Q6ZRV3 163 aa15.08■□□□□ 0
PKP3-201ENST00000331563 SSMEM1Q8WWF3 244 aa15.08■□□□□ 0
PKP3-201ENST00000331563 PRDM14Q9GZV8 571 aa15.08■□□□□ 0
PKP3-201ENST00000331563 SH2D2AQ9NP31 389 aa15.08■□□□□ 0
PKP3-201ENST00000331563 GTF3C1Q12789 2109 aa15.08■□□□□ 0
PKP3-201ENST00000331563 M0R1X1 148 aa15.07■□□□□ 0
PKP3-201ENST00000331563 BMPR1BO00238 502 aa15.07■□□□□ 0
PKP3-201ENST00000331563 CLDN14O95500 239 aa15.07■□□□□ 0
PKP3-201ENST00000331563 STAG3L2P0CL84 134 aa15.07■□□□□ 0
PKP3-201ENST00000331563 STAG3L3P0CL85 134 aa15.07■□□□□ 0
PKP3-201ENST00000331563 CX3CL1P78423 397 aa15.07■□□□□ 0
PKP3-201ENST00000331563 CXCL13O43927 109 aa15.07■□□□□ 0
PKP3-201ENST00000331563 APCSP02743 223 aa15.07■□□□□ 0
PKP3-201ENST00000331563 IGFBP7Q16270 282 aa15.07■□□□□ 0
PKP3-201ENST00000331563 Q8N7P7 452 aa15.07■□□□□ 0
PKP3-201ENST00000331563 NEUROG1Q92886 237 aa15.07■□□□□ 0
PKP3-201ENST00000331563 TRAV8-6A0A0B4J262 113 aa15.07■□□□□ 0
PKP3-201ENST00000331563 MUC21A0A0G2JKD1 596 aa15.07■□□□□ 0
PKP3-201ENST00000331563 MUC21A0A140T8X8 626 aa15.07■□□□□ 0
PKP3-201ENST00000331563 NPIPB11E5RHQ5 1161 aa15.07■□□□□ 0
PKP3-201ENST00000331563 H0YJW9 148 aa15.07■□□□□ 0
PKP3-201ENST00000331563 PPIAL4GP0DN37 164 aa15.07■□□□□ 0
PKP3-201ENST00000331563 CATR1Q13166 79 aa15.07■□□□□ 0
PKP3-201ENST00000331563 TMEM249Q2WGJ8 235 aa15.07■□□□□ 0
PKP3-201ENST00000331563 MUC21Q5SSG8 566 aa15.07■□□□□ 0
PKP3-201ENST00000331563 LINC00596Q86U02 117 aa15.07■□□□□ 0
PKP3-201ENST00000331563 OR1B1Q8NGR6 318 aa15.07■□□□□ 0
PKP3-201ENST00000331563 C17orf98A8MV24 154 aa15.06■□□□□ 0
PKP3-201ENST00000331563 M0R2Z0 102 aa15.06■□□□□ 0
PKP3-201ENST00000331563 RAB29O14966 203 aa15.06■□□□□ 0
PKP3-201ENST00000331563 RHBDL1O75783 438 aa15.06■□□□□ 0
PKP3-201ENST00000331563 GCHFRP30047 84 aa15.06■□□□□ 0
PKP3-201ENST00000331563 RAC3P60763 192 aa15.06■□□□□ 0
PKP3-201ENST00000331563 CENPWQ5EE01 88 aa15.06■□□□□ 0
PKP3-201ENST00000331563 PQLC2Q6ZP29 291 aa15.06■□□□□ 0
PKP3-201ENST00000331563 SPRY4Q9C004 299 aa15.06■□□□□ 0
PKP3-201ENST00000331563 TP73-AS1Q9UF72 201 aa15.06■□□□□ 0
PKP3-201ENST00000331563 C15orf62A8K5M9 175 aa15.06■□□□□ 0
PKP3-201ENST00000331563 RHOBP62745 196 aa15.06■□□□□ 0
PKP3-201ENST00000331563 PEF1Q9UBV8 284 aaKnown RBP15.06■□□□□ 0
PKP3-201ENST00000331563 RP1L1Q8IWN7 2480 aaPredicted RBP15.05■□□□□ 0
PKP3-201ENST00000331563 HELTA6NFD8 242 aa15.05■□□□□ 0
PKP3-201ENST00000331563 AMY1AP04745 511 aa15.05■□□□□ 0
PKP3-201ENST00000331563 MGST1P10620 155 aaKnown RBP15.05■□□□□ 0
PKP3-201ENST00000331563 MOB1BQ7L9L4 216 aa15.05■□□□□ 0
PKP3-201ENST00000331563 MT-CO2P00403 227 aa15.05■□□□□ -0
PKP3-201ENST00000331563 HLA-DQA1P01909 254 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms