RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
ATP2C1-201ENST00000328560 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
ATP2C1-201ENST00000328560 FAM215AQ9Y5M1 114 aa11.54□□□□□ -0.56
ATP2C1-201ENST00000328560 GRIFINA4D1Z8 144 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 ZNF90Q03938 601 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 RAB1CQ92928 201 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 IDI2-AS1Q9NZ38 188 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 GATCO43716 136 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 PSG5Q15238 335 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 TMEM256Q8N2U0 113 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 DDB2Q92466 427 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 IMMP2LQ96T52 175 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
ATP2C1-201ENST00000328560 PRSS46E5RG02 174 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 K7EM74 188 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 OR7C2O60412 319 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 IGHV1-46P01743 117 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 Q6ZS92 163 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 ACY3Q96HD9 319 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 ABCA1O95477 2261 aa11.52□□□□□ -0.56
ATP2C1-201ENST00000328560 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 OR10J4P0C629 311 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 WFDC8Q8IUA0 241 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 DVL1O14640 695 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 CEACAM4O75871 244 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 SCGB1D1O95968 90 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 LHBP01229 141 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 IGHV3-48P01763 117 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 SNRPCP09234 159 aaKnown RBP11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 OR5I1Q13606 314 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 HLA-DRB5Q30154 266 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 KRTCAP3Q53RY4 240 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 FAM169BQ8N8A8 192 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 ZGRF1Q86YA3 2104 aa11.52□□□□□ -0.57
ATP2C1-201ENST00000328560 CBLN1P23435 193 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 TIMP3P35625 211 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 CFHR2P36980 270 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 OR10W1Q8NGF6 305 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 VSTM5A8MXK1 200 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 BPIFB3P59826 476 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 ZNF124Q15973 351 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 IGFL3Q6UXB1 125 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 TMEM108Q6UXF1 575 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 SPTA1P02549 2419 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 CGB3P0DN86 165 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 CGB7P0DN87 165 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 CD33P20138 364 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 PAX5Q02548 391 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 IGF2-ASQ6U949 168 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 UHRF2Q96PU4 802 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 TMEM14BQ9NUH8 114 aa11.51□□□□□ -0.57
ATP2C1-201ENST00000328560 MT-CO2P00403 227 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 OR10J1P30954 320 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 ERVFC1-1P60608 527 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 LCN2P80188 198 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 CR1LQ2VPA4 569 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 ZNF664Q8N3J9 261 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 PTPRBP23467 1997 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 A0A1B0GV90 55 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 CCL3L1P16619 93 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 CRYBB3P26998 211 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 SLC35B1P78383 322 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 NABP2Q9BQ15 211 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 ELOVL5Q9NYP7 299 aa11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
ATP2C1-201ENST00000328560 TRGV8A0A0C4DH27 118 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 NUPR1O60356 82 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 TYMSP04818 313 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 OR4A8P0C604 315 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 CT45A6P0DMU7 189 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 CT45A5P0DMU8 189 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 CT45A7P0DMV0 189 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 CD40P25942 277 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 ADMP35318 185 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 STUMQ69YW2 141 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 A0A1B0GWJ7 208 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 CHRNB4P30926 498 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 OR5R1Q8NH85 324 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
ATP2C1-201ENST00000328560 APC2O95996 2303 aa11.48□□□□□ -0.57
ATP2C1-201ENST00000328560 K7EN84 100 aa11.48□□□□□ -0.57
ATP2C1-201ENST00000328560 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms