RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 ATXN7O15265 892 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 RAX2Q96IS3 184 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 WFDC1Q9HC57 220 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 SAA2P0DJI9 122 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 CA7P43166 264 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 ZNF324BQ6AW86 544 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 RPP21Q9H633 154 aaKnown RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV3-15P01624 115 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 NPIPB7O75200 414 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 TNFSF10P50591 281 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 FOXA2Q9Y261 457 aaPredicted RBP9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 GREB1Q4ZG55 1949 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 PRRC2BQ5JSZ5 2229 aaKnown RBP9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IZUMO1RA6ND01 250 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 MBNL2Q5VZF2 373 aaKnown RBP9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 TEX29Q8N6K0 151 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 PINLYPA6NC86 204 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 H7C2G1 150 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 K7ERU9 68 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 FOXH1O75593 365 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 ERASQ7Z444 233 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 A0A1B0GV90 55 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 FGF16O43320 207 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 PARD6GQ9BYG4 376 aaPredicted RBP9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 DOCK4Q8N1I0 1966 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 TRAV24A0A0B4J272 114 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 NBEAP1P0C6P0 100 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 TSPOP30536 169 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 DEPPQ9NTK1 212 aa9.16□□□□□ -0.94
SNRNP200-201ENST00000323853 YPEL1O60688 119 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 LRTM2Q8N967 370 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 YPEL2Q96QA6 119 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 ZNF319Q9P2F9 582 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 PLXNA3P51805 1871 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 DPRXA6NFQ7 191 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 SRSF7Q16629 238 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 OR52E5Q8NH55 327 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 TUBA4BQ9H853 241 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 RPL23P62829 140 aaKnown RBP9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 C15orf61A6NNL5 157 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 UPK2O00526 184 aa9.15□□□□□ -0.94
SNRNP200-201ENST00000323853 TRBV20OR9-2A0A075B6H5 130 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 RAMP3O60896 148 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 SAA1P0DJI8 122 aaPredicted RBP9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 JOSD1Q15040 202 aaPredicted RBP9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 ZNF56Q15929 161 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 PRSS8Q16651 343 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 RAXQ9Y2V3 346 aa9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 TBL2Q9Y4P3 447 aaKnown RBP9.15□□□□□ -0.95
SNRNP200-201ENST00000323853 IGHV3-66A0A0C4DH42 116 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 CRYGSP22914 178 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 WDR82Q6UXN9 313 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 NEU4Q8WWR8 484 aaPredicted RBP9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 DDB2Q92466 427 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 ARPC1AQ92747 370 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 SPRR3Q9UBC9 169 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 NUP214P35658 2090 aaPredicted RBP9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 PLP1P60201 277 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 Q9H3A6 140 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 TRPM7Q96QT4 1865 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 H0YIZ8 118 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 HOXA5P20719 270 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 MST1P26927 711 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 ATP5J2P56134 94 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 CACNG8Q8WXS5 425 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 S4R3C0 116 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 TRGV3P03979 118 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 SNRPD3P62318 126 aaKnown RBP9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 MORN2Q502X0 79 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 MIEN1Q9BRT3 115 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 GSN-AS1Q9NRJ2 163 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 PPP1R27Q86WC6 154 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 DPM3Q9P2X0 92 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 FBLL1A6NHQ2 334 aaKnown RBP9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 COX6CP09669 75 aa9.14□□□□□ -0.95
SNRNP200-201ENST00000323853 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms