RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 CX3CL1P78423 397 aa21.78■■□□□ 1.08
CTDNEP1-201ENST00000318988 PPP1R14BQ96C90 147 aa21.78■■□□□ 1.08
CTDNEP1-201ENST00000318988 RNF126Q9BV68 326 aa21.78■■□□□ 1.08
CTDNEP1-201ENST00000318988 HIVEP1P15822 2718 aa21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 H0YIZ8 118 aa21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 SLC25A4P12235 298 aa21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 GRPEL2Q8TAA5 225 aa21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 SRSF12Q8WXF0 261 aaKnown RBP21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 HYLS1Q96M11 299 aa21.77■■□□□ 1.08
CTDNEP1-201ENST00000318988 G3V3Q6 166 aa21.76■■□□□ 1.07
CTDNEP1-201ENST00000318988 NUP62P37198 522 aaPredicted RBP21.76■■□□□ 1.07
CTDNEP1-201ENST00000318988 C9orf152Q5JTZ5 239 aa21.76■■□□□ 1.07
CTDNEP1-201ENST00000318988 ZNF546Q86UE3 836 aa21.76■■□□□ 1.07
CTDNEP1-201ENST00000318988 ARPC1AQ92747 370 aa21.76■■□□□ 1.07
CTDNEP1-201ENST00000318988 NOXA1Q86UR1 476 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 SMIM8Q96KF7 97 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 DUX5Q96PT3 197 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 PSENENQ9NZ42 101 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 WSB1Q9Y6I7 421 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 TAS2R30P59541 319 aa21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 RPP30P78346 268 aaKnown RBP21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 ERHP84090 104 aaKnown RBP21.75■■□□□ 1.07
CTDNEP1-201ENST00000318988 IGHV7-81A0A0B4J1V7 117 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 MSGN1A6NI15 193 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 SH2D7A6NKC9 451 aaPredicted RBP21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 E7EUB6 86 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 AMY1AP04745 511 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 LYL1P12980 280 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 CAV2P51636 162 aa21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 INO80EQ8NBZ0 244 aaPredicted RBP21.74■■□□□ 1.07
CTDNEP1-201ENST00000318988 DNAJC9-AS1A6NH13 148 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 FAM157CP0CG43 387 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 P2RY1P47900 373 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 SSBP2P81877 361 aaPredicted RBP21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 HSD17B13Q7Z5P4 300 aaPredicted RBP21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 OR11H4Q8NGC9 324 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 OR10W1Q8NGF6 305 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 HSPB9Q9BQS6 159 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 SRSF8Q9BRL6 282 aaKnown RBP21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 ZC4H2Q9NQZ6 224 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 PARP11Q9NR21 331 aa21.73■■□□□ 1.07
CTDNEP1-201ENST00000318988 SNCAP37840 140 aa21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 VDAC2P45880 294 aaPredicted RBP21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 SPANXN5Q5MJ07 72 aa21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 TMEM65Q6PI78 240 aa21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 JMJD8Q96S16 334 aa21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 PAIP2BQ9ULR5 123 aaKnown RBP21.72■■□□□ 1.07
CTDNEP1-201ENST00000318988 CGB1A6NKQ9 187 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 H3BP45 60 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 BOLA2-SMG1P6H3BVE0 249 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 ARPC5O15511 151 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 KCNAB3O43448 404 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 TSC22D2O75157 780 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 CRLF1O75462 422 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 IFNA10P01566 189 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 OR13C7P0DN81 318 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 OR2C3Q8N628 320 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 NPFFR1Q9GZQ6 430 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 STRAPQ9Y3F4 350 aaKnown RBP21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 U3KQ87 197 aa21.71■■□□□ 1.07
CTDNEP1-201ENST00000318988 HMSDA8MTL9 139 aa21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 TMEM50AO95807 157 aa21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 PAX9P55771 341 aa21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 FAM103A1Q9BTL3 118 aaKnown RBP21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 SLC25A31Q9H0C2 315 aa21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 C11orf1Q9H5F2 150 aa21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 LYRM2Q9NU23 88 aaPredicted RBP21.7■■□□□ 1.07
CTDNEP1-201ENST00000318988 TNCP24821 2201 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 MXRA5Q9NR99 2828 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 A0A1B0GW64 132 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 INS-IGF2F8WCM5 200 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 APELAP0DMC3 54 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 BLCAPP62952 87 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 SLC35E3Q7Z769 313 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 TNFSF18Q9UNG2 199 aa21.7■■□□□ 1.06
CTDNEP1-201ENST00000318988 ANK3Q12955 4377 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 TEX22C9J3V5 150 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 CLDN34H7C241 214 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 TRIM77I1YAP6 450 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 HTR2BP41595 481 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 EIF2B2P49770 351 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 NDPQ00604 133 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 PRSS22Q9GZN4 317 aa21.69■■□□□ 1.06
CTDNEP1-201ENST00000318988 IGLC7A0M8Q6 106 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 FAM24AA6NFZ4 105 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 RPL12P30050 165 aaKnown RBP21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 SUB1P53999 127 aaKnown RBP eCLIP21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 WT1-ASQ06250 92 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 ARSJQ5FYB0 599 aaPredicted RBP21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 SLC24A4Q8NFF2 622 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 SGMS2Q8NHU3 365 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 MFFQ9GZY8 342 aa21.68■■□□□ 1.06
CTDNEP1-201ENST00000318988 TET2Q6N021 2002 aaPredicted RBP21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 ATP6V0E1O15342 81 aa21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 IGHG2P01859 326 aa21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 HILS1P60008 231 aa21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 TMEM267Q0VDI3 215 aaPredicted RBP21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 ACOT7LQ6ZUV0 252 aa21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 STX12Q86Y82 276 aa21.67■■□□□ 1.06
CTDNEP1-201ENST00000318988 REG1AP05451 166 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms