RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 NMSQ5H8A3 153 aa11.69□□□□□ -0.54
ZNF541-202ENST00000314121 ATP1A1-AS1Q5TC04 95 aa11.69□□□□□ -0.54
ZNF541-202ENST00000314121 FOXJ2Q9P0K8 574 aa11.69□□□□□ -0.54
ZNF541-202ENST00000314121 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
ZNF541-202ENST00000314121 CXCL1P09341 107 aa11.69□□□□□ -0.54
ZNF541-202ENST00000314121 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
ZNF541-202ENST00000314121 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
ZNF541-202ENST00000314121 KIAA2026Q5HYC2 2103 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 NAPSAO96009 420 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 NMUP48645 174 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 RTN4RL2Q86UN3 420 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 HIST1H2BLQ99880 126 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 TBL2Q9Y4P3 447 aaKnown RBP11.68□□□□□ -0.54
ZNF541-202ENST00000314121 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 OTX1P32242 354 aaPredicted RBP11.68□□□□□ -0.54
ZNF541-202ENST00000314121 CKS2P33552 79 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 ZNF788Q6ZQV5 615 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 LURAP1LQ8IV03 231 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
ZNF541-202ENST00000314121 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
ZNF541-202ENST00000314121 MRPL37Q9BZE1 423 aaKnown RBP11.68□□□□□ -0.54
ZNF541-202ENST00000314121 ACACAQ13085 2346 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 EP400Q96L91 3159 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 POLEQ07864 2286 aa11.68□□□□□ -0.54
ZNF541-202ENST00000314121 F2RL2O00254 374 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 TIMM23BQ5SRD1 257 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 CLDN16Q9Y5I7 305 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 HBBP68871 147 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 DEPPQ9NTK1 212 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 C1QTNF9P0C862 333 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 OR10AG1Q8NH19 301 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 IGKV3D-15A0A087WSY6 115 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
ZNF541-202ENST00000314121 BTF3P20290 206 aaKnown RBP11.67□□□□□ -0.54
ZNF541-202ENST00000314121 KBTBD11-OT1A0A1B0GTJ5 212 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 FTH1P19P0C7X4 201 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TMEM70Q9BUB7 260 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 CDX4O14627 284 aaPredicted RBP11.66□□□□□ -0.54
ZNF541-202ENST00000314121 RAMP3O60896 148 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 ZNF883P0CG24 379 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 CD40P25942 277 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 HERVK_113P61574 105 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TWIST1Q15672 202 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 RBFOX2O43251 390 aaKnown RBP eCLIP11.66□□□□□ -0.54
ZNF541-202ENST00000314121 CIDEAO60543 219 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 LIPFP07098 398 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 IGHV1-2P23083 117 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
ZNF541-202ENST00000314121 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
ZNF541-202ENST00000314121 LINC00305Q7Z4B0 112 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 DCAF16Q9NXF7 216 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 YPEL1O60688 119 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 REG1AP05451 166 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 CELA3BP08861 270 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TBR1Q16650 682 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 YPEL2Q96QA6 119 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
ZNF541-202ENST00000314121 FANCMQ8IYD8 2048 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 H3BTX0 84 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 TM4SF5O14894 197 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
ZNF541-202ENST00000314121 MST1LQ2TV78 715 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 HILPDAQ9Y5L2 63 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 SERF1AO75920 110 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
ZNF541-202ENST00000314121 PI4KAP42356 2102 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
ZNF541-202ENST00000314121 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
ZNF541-202ENST00000314121 GOLT1AQ6ZVE7 132 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 MIR17HGQ75NE6 70 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 GGNQ86UU5 652 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
ZNF541-202ENST00000314121 NEU1Q99519 415 aa11.65□□□□□ -0.54
ZNF541-202ENST00000314121 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 GFI1BQ5VTD9 330 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 SPOCK3Q9BQ16 436 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 WNT10AQ9GZT5 417 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 CACNA1HO95180 2353 aa11.64□□□□□ -0.55
ZNF541-202ENST00000314121 PEX7O00628 323 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms