RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 CFHR4Q92496 578 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 WDR83OSQ9Y284 106 aa13.44□□□□□ -0.26
CLCF1-201ENST00000312438 FLNCQ14315 2725 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 E7EUB6 86 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 ACTL6BO94805 426 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 CNTFRP26992 372 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 SSX2Q16385 188 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 BSXQ3C1V8 233 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 OR10W1Q8NGF6 305 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 NRGNQ92686 78 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 LINC00052Q96N35 136 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 NPVFQ9HCQ7 196 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
CLCF1-201ENST00000312438 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
CLCF1-201ENST00000312438 DCHS2Q6V1P9 2916 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 MYO18BQ8IUG5 2567 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 IGHV4-30-2A0A087WSY4 118 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 AGPAT2O15120 278 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 MPDU1O75352 247 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 LFNGQ8NES3 379 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 BPIFCQ8NFQ6 507 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 NPCDR1Q9BY65 106 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 LPAR2Q9HBW0 351 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 TPSG1Q9NRR2 321 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 RPRMQ9NS64 109 aa13.43□□□□□ -0.26
CLCF1-201ENST00000312438 CGB1A6NKQ9 187 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 MOSP00540 346 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
CLCF1-201ENST00000312438 PAX8Q06710 450 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 ZNF787Q6DD87 383 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 TREML4Q6UXN2 200 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 MRPL41Q8IXM3 137 aaKnown RBP13.42□□□□□ -0.26
CLCF1-201ENST00000312438 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
CLCF1-201ENST00000312438 SMCO3A2RU48 225 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 BTBD17A6NE02 478 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 MBP02144 154 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCF1-201ENST00000312438 TMEM41BQ5BJD5 291 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 SOX15O60248 233 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 RAB2AP61019 212 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 SRSF3P84103 164 aaKnown RBP13.41□□□□□ -0.26
CLCF1-201ENST00000312438 WT1-ASQ06250 92 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 NARS2Q96I59 477 aaKnown RBP13.41□□□□□ -0.26
CLCF1-201ENST00000312438 FBXL15Q9H469 300 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 TREM1Q9NP99 234 aa13.41□□□□□ -0.26
CLCF1-201ENST00000312438 COL12A1Q99715 3063 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 TMEM218A2RU14 115 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 HBE1P02100 147 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 CD5P06127 495 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
CLCF1-201ENST00000312438 RPL27AP46776 148 aaKnown RBP13.4□□□□□ -0.26
CLCF1-201ENST00000312438 COMPP49747 757 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-201ENST00000312438 AKR1C1Q04828 323 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 HNF4GQ14541 408 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 MMDQ15546 238 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 TNXAQ16473 311 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 SPSB3Q6PJ21 355 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 NPBQ8NG41 125 aa13.4□□□□□ -0.26
CLCF1-201ENST00000312438 EAF1Q96JC9 268 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-201ENST00000312438 UBR5O95071 2799 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-201ENST00000312438 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 A0A1B0GW64 132 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 NBR2O15453 112 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 COL8A1P27658 744 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-201ENST00000312438 PLGLAQ15195 96 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 ARSJQ5FYB0 599 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-201ENST00000312438 DYNAPQ8N1N2 210 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 ARHGAP32A7KAX9 2087 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 SLC25A16P16260 332 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 EBI3Q14213 229 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 HES1Q14469 280 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 PEA15Q15121 130 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 CLEC12BQ2HXU8 276 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 PBDC1Q9BVG4 233 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 KIAA1456Q9P272 454 aa13.39□□□□□ -0.27
CLCF1-201ENST00000312438 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
CLCF1-201ENST00000312438 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 NDUFA3O95167 84 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 GPX4P36969 197 aaPredicted RBP13.38□□□□□ -0.27
CLCF1-201ENST00000312438 RAB31Q13636 194 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms