RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 FOXC2Q99958 501 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
EIF3F-201ENST00000309828 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 HINT2Q9BX68 163 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
EIF3F-201ENST00000309828 ARID1AO14497 2285 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 MYOD1P15172 320 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 TMEM11P17152 192 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
EIF3F-201ENST00000309828 COMPP49747 757 aaPredicted RBP11.29□□□□□ -0.6
EIF3F-201ENST00000309828 PLGLAQ15195 96 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 TMEM249Q2WGJ8 235 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 ETV3LQ6ZN32 361 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 SCGB1C1Q8TD33 95 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 C17orf50Q8WW18 174 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
EIF3F-201ENST00000309828 TGFAP01135 160 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 SPP1P10451 314 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 SNCAP37840 140 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.68e-8■■■■□ 24.2
EIF3F-201ENST00000309828 DLK1P80370 383 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 TNXAQ16473 311 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 VWC2Q2TAL6 325 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 SLC25A24Q6NUK1 477 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 TMED6Q8WW62 240 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 UQCC1Q9NVA1 299 aa11.28□□□□□ -0.6
EIF3F-201ENST00000309828 UTP20O75691 2785 aaKnown RBP11.28□□□□□ -0.6
EIF3F-201ENST00000309828 FBN2P35556 2912 aa11.27□□□□□ -0.6
EIF3F-201ENST00000309828 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 FNDC10F2Z333 226 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 FGF16O43320 207 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 CA2P00918 260 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 OPN1MWP04001 364 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 NMBP08949 121 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 OPN1MW2P0DN77 364 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 OPN1MW3P0DN78 364 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 RAB5CP51148 216 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 HNF4GQ14541 408 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 CYB5R2Q6BCY4 276 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 TEX15Q9BXT5 2789 aa11.27□□□□□ -0.61
EIF3F-201ENST00000309828 LINC00862A6NCI5 91 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 PRSS46E5RG02 174 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 TSPAN9O75954 239 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 IFNA4P05014 189 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 FBP1P09467 338 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
EIF3F-201ENST00000309828 ATP6V0CP27449 155 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 SULT1A2P50226 295 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 AANATQ16613 207 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
EIF3F-201ENST00000309828 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 TMEM170AQ8WVE7 144 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 SAT2Q96F10 170 aaPredicted RBP11.26□□□□□ -0.61
EIF3F-201ENST00000309828 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
EIF3F-201ENST00000309828 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
EIF3F-201ENST00000309828 MED9Q9NWA0 146 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 FAM96BQ9Y3D0 163 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
EIF3F-201ENST00000309828 ABCA2Q9BZC7 2435 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 IGHV3OR16-10A0A075B7F0 116 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 A0A0U1RQK1 487 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 E7EUB6 86 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 FBXO24O75426 580 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 CD24P25063 80 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 PAX6P26367 422 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 FAM120AOSQ5T036 256 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 MAPK1IP1LQ8NDC0 245 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
EIF3F-201ENST00000309828 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
EIF3F-201ENST00000309828 SRSF12Q8WXF0 261 aaKnown RBP11.25□□□□□ -0.61
EIF3F-201ENST00000309828 TET2Q6N021 2002 aaPredicted RBP11.25□□□□□ -0.61
EIF3F-201ENST00000309828 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 A0A1B0GW64 132 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
EIF3F-201ENST00000309828 TRIM77I1YAP6 450 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 FCN1O00602 326 aa11.24□□□□□ -0.61
EIF3F-201ENST00000309828 SOX15O60248 233 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms