RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 LAMA5O15230 3695 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 M0R1X1 148 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 CECR9P0C854 216 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 INO80CQ6PI98 192 aaPredicted RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 TREML4Q6UXN2 200 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 WDR31Q8NA23 367 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 SSMEM1Q8WWF3 244 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 LEAP2Q969E1 77 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 GUCD1Q96NT3 240 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 UHRF2Q96PU4 802 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 MS4A5Q9H3V2 200 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 ZNF586Q9NXT0 402 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 INTS1Q8N201 2190 aaKnown RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 IGHV3OR15-7A0A075B7D8 119 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 SPINT2O43291 252 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 TIMP3P35625 211 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 YPEL3P61236 119 aaPredicted RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 SMIM21Q3B7S5 101 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 Q6ZT83 130 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 MRPL52Q86TS9 123 aaKnown RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 C1orf174Q8IYL3 243 aa15.37■□□□□ 0.05
RAPH1-201ENST00000308091 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 YLPM1P49750 1951 aaKnown RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 TET2Q6N021 2002 aaPredicted RBP15.37■□□□□ 0.05
RAPH1-201ENST00000308091 IGLC2P0DOY2 106 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 IGLC3P0DOY3 106 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 OR8I2Q8N0Y5 310 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 OR4B1Q8NGF8 309 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 MGST2Q99735 147 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 GAL3ST2Q9H3Q3 398 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 CLCF1Q9UBD9 225 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 SMG1Q96Q15 3661 aaKnown RBP15.36■□□□□ 0.05
RAPH1-201ENST00000308091 K7EN84 100 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 HOXC12P31275 282 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 CTRLP40313 264 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 SRSF6Q13247 344 aaKnown RBP15.36■□□□□ 0.05
RAPH1-201ENST00000308091 HES3Q5TGS1 186 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 OR4A16Q8NH70 328 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 SLC45A2Q9UMX9 530 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 MAP1BP46821 2468 aaKnown RBP15.36■□□□□ 0.05
RAPH1-201ENST00000308091 PCNX2A6NKB5 2137 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 IGKV3-15P01624 115 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 GPX1P07203 203 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 PRDX2P32119 198 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 ZNF134P52741 427 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 PRR7Q8TB68 274 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 UQCR10Q9UDW1 63 aa15.36■□□□□ 0.05
RAPH1-201ENST00000308091 PDE6DO43924 150 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 ZNF883P0CG24 379 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 OR2Z1Q8NG97 314 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 OR4C5Q8NGB2 326 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 NAT8BQ9UHF3 227 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 DUSP13Q9UII6 198 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 PDLIM3Q53GG5 364 aaPredicted RBP15.35■□□□□ 0.05
RAPH1-201ENST00000308091 SPRNQ5BIV9 151 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 VHLLQ6RSH7 139 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 C1orf229Q6ZS94 237 aaPredicted RBP15.35■□□□□ 0.05
RAPH1-201ENST00000308091 C9orf106Q8NAJ2 232 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 RNF2Q99496 336 aa15.35■□□□□ 0.05
RAPH1-201ENST00000308091 CDX4O14627 284 aaPredicted RBP15.34■□□□□ 0.05
RAPH1-201ENST00000308091 KIR2DL2P43627 348 aaPredicted RBP15.34■□□□□ 0.05
RAPH1-201ENST00000308091 KLF3P57682 345 aaPredicted RBP15.34■□□□□ 0.05
RAPH1-201ENST00000308091 UBE2V1Q13404 147 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 FXYD3Q14802 87 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 SPATA31B1PQ5VZV4 182 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 TMEM178AQ8NBL3 297 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 ZNRF1Q8ND25 227 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 ST6GALNAC6Q969X2 333 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 GGTLC1Q9BX51 225 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 IGKV1D-17A0A075B6S4 117 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 MORN2Q502X0 79 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 KCNIP2Q9NS61 270 aa15.34■□□□□ 0.05
RAPH1-201ENST00000308091 C3orf79P0CE67 100 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 TCTEX1D1Q8N7M0 179 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 SELENOKQ9Y6D0 94 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 TMPRSS2O15393 492 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 GFRA3O60609 400 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 MSMPQ1L6U9 139 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 C1orf159Q96HA4 380 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 VPS25Q9BRG1 176 aa15.33■□□□□ 0.04
RAPH1-201ENST00000308091 YTHDF2Q9Y5A9 579 aaKnown RBP15.33■□□□□ 0.04
RAPH1-201ENST00000308091 MYOD1P15172 320 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 VDAC2P45880 294 aaPredicted RBP15.32■□□□□ 0.04
RAPH1-201ENST00000308091 CDKN1BP46527 198 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 ZNF83P51522 516 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 ORAOV1Q8WV07 137 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 TNCP24821 2201 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 ADH4P08319 380 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 CD99P14209 185 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 CCL11P51671 97 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 HTD2P86397 168 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 AARDQ4LEZ3 155 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 FAM201AQ5SY85 155 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 SEPSECSQ9HD40 501 aaKnown RBP15.32■□□□□ 0.04
RAPH1-201ENST00000308091 TMEM140Q9NV12 185 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 COX11Q9Y6N1 276 aa15.32■□□□□ 0.04
RAPH1-201ENST00000308091 A0A1W2PS18 150 aa15.31■□□□□ 0.04
RAPH1-201ENST00000308091 ZNF253O75346 499 aa15.31■□□□□ 0.04
RAPH1-201ENST00000308091 RELBQ01201 579 aa15.31■□□□□ 0.04
RAPH1-201ENST00000308091 VAMP3Q15836 100 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms