RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 DOCK6Q96HP0 2047 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 PUSL1Q8N0Z8 303 aaKnown RBP12.14□□□□□ -0.47
HIPK3-201ENST00000303296 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
HIPK3-201ENST00000303296 ZNF79Q15937 498 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 ZNF407Q9C0G0 2248 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 GCM2O75603 506 aaPredicted RBP12.14□□□□□ -0.47
HIPK3-201ENST00000303296 CGAP01215 116 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 LRP10Q7Z4F1 713 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 TMEM186Q96B77 213 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 SIGMAR1Q99720 223 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 SFXN3Q9BWM7 321 aa12.14□□□□□ -0.47
HIPK3-201ENST00000303296 ZNF98A6NK75 572 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 NDUFA2O43678 99 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 APCDD1LQ8NCL9 501 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 DDX60Q8IY21 1712 aaKnown RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 MYO7BQ6PIF6 2116 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 Q6ZNB5 142 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 ATG4DQ86TL0 474 aaPredicted RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 ZPLD1Q8TCW7 415 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 WDFY2Q96P53 400 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 CHTOPQ9Y3Y2 248 aaKnown RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 PAX1P15863 534 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 CCL1P22362 96 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 TBR1Q16650 682 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 MZB1Q8WU39 189 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
HIPK3-201ENST00000303296 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 GLIPR1P48060 266 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 OR13A1Q8NGR1 328 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
HIPK3-201ENST00000303296 TRBV9A0A0B4J1U6 114 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 CD5LO43866 347 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 GCHFRP30047 84 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 KIF26BQ2KJY2 2108 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 KLK8O60259 260 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 DMKNQ6E0U4 476 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-201ENST00000303296 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 SAP30O75446 220 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 PRB2P02812 416 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-201ENST00000303296 A8MWV9 139 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 ORMDL3Q8N138 153 aa12.12□□□□□ -0.47
HIPK3-201ENST00000303296 MRPL32Q9BYC8 188 aaKnown RBP12.12□□□□□ -0.47
HIPK3-201ENST00000303296 ZNF146Q15072 292 aa12.11□□□□□ -0.47
HIPK3-201ENST00000303296 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
HIPK3-201ENST00000303296 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
HIPK3-201ENST00000303296 CD24P25063 80 aa12.11□□□□□ -0.47
HIPK3-201ENST00000303296 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 TRAV25A0A0B4J276 109 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 EGR4Q05215 589 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 XAF1Q6GPH4 301 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 SPTA1P02549 2419 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
HIPK3-201ENST00000303296 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 KCNE1BA0A087WTH5 132 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 TGIF1Q15583 401 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 DLL3Q9NYJ7 618 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 EPDR1Q9UM22 224 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 DOCK5Q9H7D0 1870 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 MRPL52Q86TS9 123 aaKnown RBP12.1□□□□□ -0.47
HIPK3-201ENST00000303296 RFLNBQ8N5W9 214 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
HIPK3-201ENST00000303296 ZNF703Q9H7S9 590 aaPredicted RBP12.1□□□□□ -0.47
HIPK3-201ENST00000303296 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
HIPK3-201ENST00000303296 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
HIPK3-201ENST00000303296 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 PDCD11Q14690 1871 aaKnown RBP12.09□□□□□ -0.47
HIPK3-201ENST00000303296 GAGE2AQ6NT46 116 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 P2RY6Q15077 328 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 C5orf30Q96GV9 206 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 Q9H3A6 140 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 SPTBN1Q01082 2364 aaKnown RBP12.09□□□□□ -0.47
HIPK3-201ENST00000303296 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 RND3P61587 244 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
HIPK3-201ENST00000303296 SNHG12Q9BXW3 62 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 DYSFO75923 2080 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms