RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 CLDND2Q8NHS1 167 aa8.54□□□□□ -1.04
CLP1-201ENST00000302731 RCC1LQ96I51 464 aaKnown RBP8.54□□□□□ -1.04
CLP1-201ENST00000302731 EIF5A2Q9GZV4 153 aaKnown RBP8.54□□□□□ -1.04
CLP1-201ENST00000302731 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
CLP1-201ENST00000302731 ZNF430Q9H8G1 570 aaPredicted RBP8.54□□□□□ -1.04
CLP1-201ENST00000302731 SIRT7Q9NRC8 400 aa8.54□□□□□ -1.04
CLP1-201ENST00000302731 LSM4Q9Y4Z0 139 aaKnown RBP8.54□□□□□ -1.04
CLP1-201ENST00000302731 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
CLP1-201ENST00000302731 NBEAQ8NFP9 2946 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 CTXND1A0A1B0GTU2 59 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 RNF224P0DH78 156 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 RNASE2P10153 161 aaKnown RBP8.53□□□□□ -1.04
CLP1-201ENST00000302731 RAB31Q13636 194 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 PSG5Q15238 335 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 ZNF726P1Q15940 193 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 PRSS8Q16651 343 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 ACOT6Q3I5F7 207 aaPredicted RBP8.53□□□□□ -1.04
CLP1-201ENST00000302731 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 ACSM6Q6P461 480 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 TEPPQ6URK8 271 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 RPP25LQ8N5L8 163 aaKnown RBP8.53□□□□□ -1.04
CLP1-201ENST00000302731 CACNG8Q8WXS5 425 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 SIRPDQ9H106 197 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 SIGLEC9Q9Y336 463 aa8.53□□□□□ -1.04
CLP1-201ENST00000302731 IGHV3-72A0A0B4J1Y9 119 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 C9JQL5 133 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 CYB5BO43169 146 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 VENTXO95231 258 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 SNAPINO95295 136 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 GPX4P36969 197 aaPredicted RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLP1-201ENST00000302731 ELLP55199 621 aaPredicted RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 CCL20P78556 96 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 DEFA5Q01523 94 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 TMEM249Q2WGJ8 235 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 LDLRAD2Q5SZI1 272 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 ZNF787Q6DD87 383 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 VMO1Q7Z5L0 202 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 TMEM144Q7Z5S9 345 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 OR10G4Q8NGN3 311 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 RNASEH2CQ8TDP1 164 aaKnown RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 RITA1Q96K30 269 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 PIMREGQ9BSJ6 248 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 ACTR3CQ9C0K3 210 aaPredicted RBP8.52□□□□□ -1.05
CLP1-201ENST00000302731 SLC35B3Q9H1N7 401 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 SLC39A9Q9NUM3 307 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 USP24Q9UPU5 2620 aa8.52□□□□□ -1.05
CLP1-201ENST00000302731 SMCO3A2RU48 225 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 MAP1LC3B2A6NCE7 125 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 VWC2LB2RUY7 222 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 SEC14L6B5MCN3 397 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 TIMM23O14925 209 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 SCO1O75880 301 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 IGKV1D-33P01593 117 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 IGKV1-33P01594 117 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 OPN1MWP04001 364 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 HSPB1P04792 205 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 OPN1MW2P0DN77 364 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 OPN1MW3P0DN78 364 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 PAX1P15863 534 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 PPT1P50897 306 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 PRB3Q04118 309 aaPredicted RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 CD69Q07108 199 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 PPP1R27Q86WC6 154 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 OR10W1Q8NGF6 305 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 CFHR4Q92496 578 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 MGST2Q99735 147 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 SRSF8Q9BRL6 282 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 GGTLC1Q9BX51 225 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 NKX6-2Q9C056 277 aaPredicted RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 MAP1LC3BQ9GZQ8 125 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 TBL2Q9Y4P3 447 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 TNCP24821 2201 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 IGSF10Q6WRI0 2623 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 E7EUB6 86 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 ACTL6BO94805 426 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 IFNA1P01562 189 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 RPL27AP46776 148 aaKnown RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 COMPP49747 757 aaPredicted RBP8.51□□□□□ -1.05
CLP1-201ENST00000302731 UBE2E1P51965 193 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 LCN2P80188 198 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 GUCA2BQ16661 112 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 LCN15Q6UWW0 184 aa8.51□□□□□ -1.05
CLP1-201ENST00000302731 NPBQ8NG41 125 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms