RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 MAP1AP78559 2803 aaPredicted RBP17.27■□□□□ 0.36
SOX17-201ENST00000297316 IGHV3-72A0A0B4J1Y9 119 aa17.27■□□□□ 0.35
SOX17-201ENST00000297316 IGLV1-47P01700 117 aa17.27■□□□□ 0.35
SOX17-201ENST00000297316 MT-ND4LP03901 98 aa17.27■□□□□ 0.35
SOX17-201ENST00000297316 RPP25LQ8N5L8 163 aaKnown RBP17.27■□□□□ 0.35
SOX17-201ENST00000297316 CLDND2Q8NHS1 167 aa17.27■□□□□ 0.35
SOX17-201ENST00000297316 HINT2Q9BX68 163 aa17.27■□□□□ 0.35
SOX17-201ENST00000297316 FBP1P09467 338 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 ICAM4Q14773 271 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 RNF212Q495C1 297 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 PNKDQ8N490 385 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 HARBI1Q96MB7 349 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 SLC35B3Q9H1N7 401 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 TRAV1-1A0A0B4J248 108 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PPH5 198 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 PLXNB1O43157 2135 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 APOA2P02652 100 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 HLA-DRB5Q30154 266 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 TGIF2LXQ8IUE1 241 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 MBD3L1Q8WWY6 194 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 NRGNQ92686 78 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 CLEC7AQ9BXN2 247 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 TUBA4BQ9H853 241 aa17.26■□□□□ 0.35
SOX17-201ENST00000297316 ZNF137PP52743 207 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 ZNF787Q6DD87 383 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 CCL19Q99731 98 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 SPOCK3Q9BQ16 436 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 CELSR2Q9HCU4 2923 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 CENPEQ02224 2701 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 HBE1P02100 147 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 DEFA4P12838 97 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 CD1BP29016 333 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 KLRD1Q13241 179 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 TMEM177Q53S58 311 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 OSR1Q8TAX0 266 aaPredicted RBP17.25■□□□□ 0.35
SOX17-201ENST00000297316 RITA1Q96K30 269 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 BET1LQ9NYM9 111 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 PRNDQ9UKY0 176 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 WDR83OSQ9Y284 106 aa17.25■□□□□ 0.35
SOX17-201ENST00000297316 KBTBD11O94819 623 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 SCAF4O95104 1147 aaKnown RBP17.24■□□□□ 0.35
SOX17-201ENST00000297316 LY86O95711 162 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 IGHV2-5P01817 119 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 RPP30P78346 268 aaKnown RBP17.24■□□□□ 0.35
SOX17-201ENST00000297316 LDLRAD2Q5SZI1 272 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 TEX50A0A1B0GTY4 177 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 C5orf52A6NGY3 159 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 CA2P00918 260 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 LCN2P80188 198 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 ZNF506Q5JVG8 444 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 FFAR4Q5NUL3 377 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 FAM71F2Q6NXP2 309 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 SLC24A4Q8NFF2 622 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 OR4P4Q8NGL7 312 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 C1orf159Q96HA4 380 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 GNG13Q9P2W3 67 aa17.24■□□□□ 0.35
SOX17-201ENST00000297316 SMCO3A2RU48 225 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 BUB1B-PAK6H3BSN5 160 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 HMGB3O15347 200 aaKnown RBP17.23■□□□□ 0.35
SOX17-201ENST00000297316 RBP4P02753 201 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 S100A6P06703 90 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 SRP19P09132 144 aaKnown RBP17.23■□□□□ 0.35
SOX17-201ENST00000297316 FLYWCH2Q96CP2 140 aaKnown RBP17.23■□□□□ 0.35
SOX17-201ENST00000297316 SLC25A22Q9H936 323 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 FBN2P35556 2912 aa17.23■□□□□ 0.35
SOX17-201ENST00000297316 MAP1LC3B2A6NCE7 125 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 NPY1RP25929 384 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 PRRX1P54821 245 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 PRCDQ00LT1 54 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 RHEBQ15382 184 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 TREML4Q6UXN2 200 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 LHX4Q969G2 390 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 MAP1LC3BQ9GZQ8 125 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 hCG_1809904A0A1W2PP81 198 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PR64 198 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PRD5 423 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PRF3 423 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PRM7 423 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PRV1 198 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 ZNF257Q9Y2Q1 563 aa17.22■□□□□ 0.35
SOX17-201ENST00000297316 CSMD1Q96PZ7 3565 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 LOC102723971A0A1B0GUV8 181 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 A0A1W2PPE2 198 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 E7EUB6 86 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 IGLV2-23P01705 113 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 RAB5AP20339 215 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 PDPNQ86YL7 162 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 FAM24BQ8N5W8 94 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 ENY2Q9NPA8 101 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 ABCA2Q9BZC7 2435 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 KMT2BQ9UMN6 2715 aaPredicted RBP17.21■□□□□ 0.35
SOX17-201ENST00000297316 ZFP92A6NM28 416 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 LMO4P61968 165 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 ARSJQ5FYB0 599 aaPredicted RBP17.21■□□□□ 0.35
SOX17-201ENST00000297316 GCSAMLQ5JQS6 135 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 BEND2Q8NDZ0 799 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 OR10W1Q8NGF6 305 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 OR10G4Q8NGN3 311 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 OR10G9Q8NGN4 311 aa17.21■□□□□ 0.35
SOX17-201ENST00000297316 OR10G7Q8NGN6 311 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms