RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
GDF9-201ENST00000296875 LSM4Q9Y4Z0 139 aaKnown RBP11.94□□□□□ -0.5
GDF9-201ENST00000296875 URGCP-MRPS24S4R325 110 aa11.94□□□□□ -0.5
GDF9-201ENST00000296875 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
GDF9-201ENST00000296875 THBDP07204 575 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 CD3EP07766 207 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
GDF9-201ENST00000296875 APOBEC3AP31941 199 aaPredicted RBP11.93□□□□□ -0.5
GDF9-201ENST00000296875 MC5RP33032 325 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
GDF9-201ENST00000296875 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
GDF9-201ENST00000296875 NCMAPQ5T1S8 102 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 OR10X1Q8NGY0 326 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 RNASE6Q93091 150 aaKnown RBP11.93□□□□□ -0.5
GDF9-201ENST00000296875 MGST2Q99735 147 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 DOK5Q9P104 306 aa11.93□□□□□ -0.5
GDF9-201ENST00000296875 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 FSTL3O95633 263 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CT45A6P0DMU7 189 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CT45A5P0DMU8 189 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CT45A7P0DMV0 189 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 SUB1P53999 127 aaKnown RBP eCLIP11.92□□□□□ -0.5
GDF9-201ENST00000296875 ERVFRD-1P60508 538 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 ZNF596Q8TC21 504 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CACNG8Q8WXS5 425 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 TNFRSF14Q92956 283 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 FLYWCH2Q96CP2 140 aaKnown RBP11.92□□□□□ -0.5
GDF9-201ENST00000296875 UHRF2Q96PU4 802 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 RNF2Q99496 336 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CFAP46Q8IYW2 2715 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 TRAV3A0A0B4J244 114 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 HMGB3O15347 200 aaKnown RBP11.92□□□□□ -0.5
GDF9-201ENST00000296875 CA2P00918 260 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 SFTPCP11686 197 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 S100A2P29034 98 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
GDF9-201ENST00000296875 RPL23P62829 140 aaKnown RBP11.92□□□□□ -0.5
GDF9-201ENST00000296875 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 CST9LP1Q5W188 147 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 Q8N7P7 452 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
GDF9-201ENST00000296875 CCL17Q92583 94 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 NEUROG1Q92886 237 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 HINT2Q9BX68 163 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 SH3BGRL2Q9UJC5 107 aa11.92□□□□□ -0.5
GDF9-201ENST00000296875 TAS2R45P59539 299 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 C22orf34Q6ZV56 151 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
GDF9-201ENST00000296875 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 PPP5D1E7EU14 171 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 CXCL1P09341 107 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 HOXA5P20719 270 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 GPX4P36969 197 aaPredicted RBP11.9□□□□□ -0.5
GDF9-201ENST00000296875 GALR1P47211 349 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
GDF9-201ENST00000296875 RPL8P62917 257 aaKnown RBP11.9□□□□□ -0.5
GDF9-201ENST00000296875 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 TMEM200BQ69YZ2 307 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 ZNF343Q6P1L6 599 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 DUX4L9Q6RFH8 374 aaPredicted RBP11.9□□□□□ -0.5
GDF9-201ENST00000296875 PNKDQ8N490 385 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 OR9G1Q8NH87 305 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 WFIKKN1Q96NZ8 548 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 WASHC3Q9Y3C0 194 aa11.9□□□□□ -0.5
GDF9-201ENST00000296875 A0A087X0M5 115 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 IGHV1-69-2A0A0G2JMI3 117 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 A0A1B0GX30 115 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 ARL14EPLP0DKL9 152 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 ZNF137PP52743 207 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 FAM3BP58499 235 aaPredicted RBP11.9□□□□□ -0.51
GDF9-201ENST00000296875 MIC13Q5XKP0 118 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 STPG3Q8N7X2 389 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 DYSFO75923 2080 aa11.9□□□□□ -0.51
GDF9-201ENST00000296875 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
GDF9-201ENST00000296875 SHISA9B4DS77 424 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 H0YJW9 148 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 YIF1AO95070 293 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
GDF9-201ENST00000296875 LGALS7P47929 136 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 LCN2P80188 198 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
GDF9-201ENST00000296875 FBXL19-AS1Q494R0 122 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms