RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 POLR2GP62487 172 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 RAB32Q13637 225 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 Q5BKY6 102 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 SLC35E3Q7Z769 313 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 PPP1R1CQ8WVI7 109 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 PRSS22Q9GZN4 317 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 RBKSQ9H477 322 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 PARP11Q9NR21 331 aa17.17■□□□□ 0.34
PDLIM3-203ENST00000284771 FAM90A26D6RGX4 464 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 WT1-ASQ06250 92 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 LFNGQ8NES3 379 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 SGMS2Q8NHU3 365 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 NOL4LQ96MY1 436 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 RCL1Q9Y2P8 373 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 IGLC7A0M8Q6 106 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 G3V318 75 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 TSPAN9O75954 239 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 IGF1P05019 195 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 GIPP09681 153 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 AREGP15514 252 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 RPL15P61313 204 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 CYCSP99999 105 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 LRRC37A5PQ49AS3 106 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 ST6GAL2Q96JF0 529 aa17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 RANGRFQ9HD47 186 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-203ENST00000284771 K7EPK0 472 aa17.15■□□□□ 0.34
PDLIM3-203ENST00000284771 SYNGR2O43760 224 aa17.15■□□□□ 0.34
PDLIM3-203ENST00000284771 TMEM50AO95807 157 aa17.15■□□□□ 0.34
PDLIM3-203ENST00000284771 VDAC2P45880 294 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-203ENST00000284771 H0YIZ8 118 aa17.14■□□□□ 0.33
PDLIM3-203ENST00000284771 CD300CQ08708 224 aa17.14■□□□□ 0.33
PDLIM3-203ENST00000284771 ABHD5Q8WTS1 349 aa17.14■□□□□ 0.33
PDLIM3-203ENST00000284771 WSB1Q9Y6I7 421 aa17.14■□□□□ 0.33
PDLIM3-203ENST00000284771 CEBPZOSA8MTT3 80 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 G3V3Q6 166 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 KCNAB3O43448 404 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 CRIP2P52943 208 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 PAX9P55771 341 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 C19orf54Q5BKX5 351 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 C19orf35Q6ZS72 473 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 PRIMA1Q86XR5 153 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 DTD1Q8TEA8 209 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 C11orf1Q9H5F2 150 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 SERTAD4Q9NUC0 356 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 LSM5Q9Y4Y9 91 aaKnown RBP17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 TRAV14DV4A0A0A6YYC5 116 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 REG1AP05451 166 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 CRYBA1P05813 215 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 PSMB6P28072 239 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 RNF126Q9BV68 326 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 PLEKHA3Q9HB20 300 aa17.13■□□□□ 0.33
PDLIM3-203ENST00000284771 INS-IGF2F8WCM5 200 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 SMLR1H3BR10 107 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 WRBO00258 174 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 SSSCA1O60232 199 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 CCNKO75909 580 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 MPC2O95563 127 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 OR13C7P0DN81 318 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 IAPPP10997 89 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 S100A10P60903 97 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 RAP2BP61225 183 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 ECSCRQ19T08 205 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 AKIRIN2Q53H80 203 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 CACFD1Q9UGQ2 172 aa17.12■□□□□ 0.33
PDLIM3-203ENST00000284771 AP4M1O00189 453 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 SOX15O60248 233 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 HOXA1P49639 335 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 STPG2Q8N412 459 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 OR2T35Q8NGX2 323 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 NEURL2Q9BR09 285 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 OR5AC2Q9NZP5 309 aa17.11■□□□□ 0.33
PDLIM3-203ENST00000284771 PPIFP30405 207 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 UNQ5815/PRO19632Q6UWF5 114 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 OR2C3Q8N628 320 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 TMEM170AQ8WVE7 144 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 ASB13Q8WXK3 278 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 HEYLQ9NQ87 328 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 TRAV41A0A0B4J266 112 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 A0A1W2PN81 502 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 MED6O75586 246 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 DEDDO75618 318 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 CTRB1P17538 263 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 CHRNA7P36544 502 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 CTRB2Q6GPI1 263 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 C10orf99Q6UWK7 81 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 TTC9CQ8N5M4 171 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 OR5T1Q8NG75 326 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 LINC01006Q8NI28 216 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 SRSF8Q9BRL6 282 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 C16orf95Q9H693 158 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 DMRT1Q9Y5R6 373 aa17.1■□□□□ 0.33
PDLIM3-203ENST00000284771 ATRQ13535 2644 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 CRYGCP07315 174 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 CFHR3Q02985 330 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 BSXQ3C1V8 233 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 OR2T6Q8NHC8 308 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 ZNF580Q9UK33 172 aa17.09■□□□□ 0.33
PDLIM3-203ENST00000284771 MFAP2P55001 183 aa17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 TMEM267Q0VDI3 215 aaPredicted RBP17.08■□□□□ 0.32
PDLIM3-203ENST00000284771 ARSJQ5FYB0 599 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms