RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PTPN13Q12923 2485 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 LOC105371242A0A075B767 164 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 IGHV3-72A0A0B4J1Y9 119 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 A0A1W2PPH5 198 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 SCAF4O95104 1147 aaKnown RBP16.91■□□□□ 0.3
YBX3-202ENST00000279550 RBP4P02753 201 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 NPY1RP25929 384 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 IL3RAP26951 378 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 CD1BP29016 333 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 DEFB113Q30KQ7 82 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 RPP25LQ8N5L8 163 aaKnown RBP16.91■□□□□ 0.3
YBX3-202ENST00000279550 SLC24A4Q8NFF2 622 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 PCGF1Q9BSM1 259 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 CLEC7AQ9BXN2 247 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 ENY2Q9NPA8 101 aa16.91■□□□□ 0.3
YBX3-202ENST00000279550 CENPEQ02224 2701 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 FGF8P55075 233 aaPredicted RBP16.9■□□□□ 0.3
YBX3-202ENST00000279550 ICAM4Q14773 271 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 FFAR4Q5NUL3 377 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 TNFRSF14Q92956 283 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 AIFM2Q9BRQ8 373 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 KPTNQ9Y664 436 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 SMCO3A2RU48 225 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 IFNA4P05014 189 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 LIPFP07098 398 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 PRRX1P54821 245 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 DLK1P80370 383 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 ZNF506Q5JVG8 444 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 OR4C13Q8NGP0 309 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 C1orf159Q96HA4 380 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 PLEKHA3Q9HB20 300 aa16.9■□□□□ 0.3
YBX3-202ENST00000279550 IGHV4-61A0A0C4DH41 118 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 OR13C7P0DN81 318 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 ZFP36P26651 326 aaKnown RBP16.89■□□□□ 0.29
YBX3-202ENST00000279550 RAB11AP62491 216 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 TREML4Q6UXN2 200 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 LRRC75A-AS1Q8N1F1 130 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 PNKDQ8N490 385 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 TMEM167AQ8TBQ9 72 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 SLC35B3Q9H1N7 401 aa16.89■□□□□ 0.29
YBX3-202ENST00000279550 BUB1B-PAK6H3BSN5 160 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 SNAPINO95295 136 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 BEND2Q8NDZ0 799 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 OR10W1Q8NGF6 305 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 OR4P4Q8NGL7 312 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 GGACTQ9BVM4 153 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 TPSG1Q9NRR2 321 aa16.88■□□□□ 0.29
YBX3-202ENST00000279550 LOC102723971A0A1B0GUV8 181 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 MAP1LC3B2A6NCE7 125 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 SRP19P09132 144 aaKnown RBP16.87■□□□□ 0.29
YBX3-202ENST00000279550 FBP1P09467 338 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 RAB13P51153 203 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 RPL8P62917 257 aaKnown RBP16.87■□□□□ 0.29
YBX3-202ENST00000279550 MRGPRG-AS1Q2M3A8 158 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 ARSJQ5FYB0 599 aaPredicted RBP16.87■□□□□ 0.29
YBX3-202ENST00000279550 ZNF709Q8N972 641 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 CLRN3Q8NCR9 226 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 RXFP4Q8TDU9 374 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 MBD6Q96DN6 1003 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 MAP1LC3BQ9GZQ8 125 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 SLC25A22Q9H936 323 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 TNCP24821 2201 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 CGB1A6NKQ9 187 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 E7EUB6 86 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 ENSAO43768 121 aaKnown RBP16.87■□□□□ 0.29
YBX3-202ENST00000279550 MC5RP33032 325 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 ARF6P62330 175 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 LCN2P80188 198 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 C10orf55Q5SWW7 151 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 OR10G4Q8NGN3 311 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 OR10G9Q8NGN4 311 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 OR10G7Q8NGN6 311 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 OR5B3Q8NH48 314 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 MGST2Q99735 147 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 NDUFA4L2Q9NRX3 87 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 GNG13Q9P2W3 67 aa16.87■□□□□ 0.29
YBX3-202ENST00000279550 DEFA4P12838 97 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 USF1P22415 310 aaPredicted RBP16.86■□□□□ 0.29
YBX3-202ENST00000279550 LDLRAD2Q5SZI1 272 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 FAM122CQ6P4D5 195 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 TMEM88Q6PEY1 159 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 CBLN2Q8IUK8 224 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 ZNF430Q9H8G1 570 aaPredicted RBP16.86■□□□□ 0.29
YBX3-202ENST00000279550 APCP25054 2843 aa16.86■□□□□ 0.29
YBX3-202ENST00000279550 IGHV1-3A0A0C4DH29 117 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 hCG_1809904A0A1W2PP81 198 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 A0A1W2PPE2 198 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 A0A1W2PR64 198 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 A0A1W2PRV1 198 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 C17orf112F2Z3M2 114 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 LY6LH3BQJ8 138 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 TSPAN4O14817 238 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 HMGB3O15347 200 aaKnown RBP16.85■□□□□ 0.29
YBX3-202ENST00000279550 SLC25A17O43808 307 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 RNASE2P10153 161 aaKnown RBP16.85■□□□□ 0.29
YBX3-202ENST00000279550 SLC25A16P16260 332 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 PAX2Q02962 417 aa16.85■□□□□ 0.29
YBX3-202ENST00000279550 BSXQ3C1V8 233 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms