RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TRAV24A0A0B4J272 114 aa9.47□□□□□ -0.89
USP6NL-201ENST00000277575 RRHO14718 337 aa9.47□□□□□ -0.89
USP6NL-201ENST00000277575 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
USP6NL-201ENST00000277575 LAMTOR1Q6IAA8 161 aa9.47□□□□□ -0.89
USP6NL-201ENST00000277575 MDS2Q8NDY4 140 aa9.47□□□□□ -0.89
USP6NL-201ENST00000277575 PACRGQ96M98 296 aaPredicted RBP9.47□□□□□ -0.89
USP6NL-201ENST00000277575 RARRES2Q99969 163 aa9.47□□□□□ -0.89
USP6NL-201ENST00000277575 IGHV3OR16-13A0A075B7E8 117 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 IGHV3-74A0A0B4J1X5 117 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 TGFAP01135 160 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 RAB9AP51151 201 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.89
USP6NL-201ENST00000277575 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.89
USP6NL-201ENST00000277575 Q6ZN92 141 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 EEF1AKMT3Q96AZ1 226 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 SGK494Q96LW2 274 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 IFI27L2Q9H2X8 130 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.89
USP6NL-201ENST00000277575 TFF1P04155 84 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
USP6NL-201ENST00000277575 IGKV1-12A0A0C4DH73 117 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 YPEL1O60688 119 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 IL18BPO95998 194 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 IGKV1D-12P01611 117 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 G0S2P27469 103 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 RNFT1Q5M7Z0 435 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 YPEL2Q96QA6 119 aa9.46□□□□□ -0.9
USP6NL-201ENST00000277575 A0A0B4J293 547 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 MT-ND6P03923 174 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 TRGV3P03979 118 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 RTN4RL2Q86UN3 420 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 GFI1Q99684 422 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 MRPL32Q9BYC8 188 aaKnown RBP9.45□□□□□ -0.9
USP6NL-201ENST00000277575 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
USP6NL-201ENST00000277575 NOTCH4Q99466 2003 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
USP6NL-201ENST00000277575 MEOX2P50222 304 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 RELQ04864 619 aaPredicted RBP9.45□□□□□ -0.9
USP6NL-201ENST00000277575 EIF4E3Q8N5X7 224 aaKnown RBP9.45□□□□□ -0.9
USP6NL-201ENST00000277575 IGHV1-46P01743 117 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 GCHFRP30047 84 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 MAS1LP35410 378 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF497Q6ZNH5 498 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 DDB2Q92466 427 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 ZGRF1Q86YA3 2104 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 GTF3C1Q12789 2109 aa9.45□□□□□ -0.9
USP6NL-201ENST00000277575 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
USP6NL-201ENST00000277575 TWIST1Q15672 202 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 S4R3C0 116 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 SNCGO76070 127 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 EGR1P18146 543 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 PRB3Q04118 309 aaPredicted RBP9.44□□□□□ -0.9
USP6NL-201ENST00000277575 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 CYP2G1PQ6ZSU1 146 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 GGACTQ9BVM4 153 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 PARLQ9H300 379 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 MGAMO43451 1857 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 BTCP35070 178 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 MORN2Q502X0 79 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 TMEM97Q5BJF2 176 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 Q6ZS92 163 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 AUP1Q9Y679 476 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 SAA2-SAA4A0A096LPE2 208 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 SAA2P0DJI9 122 aaPredicted RBP9.44□□□□□ -0.9
USP6NL-201ENST00000277575 PLXNA3P51805 1871 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 PSG9Q00887 426 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 GOLT1AQ6ZVE7 132 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
USP6NL-201ENST00000277575 COL6A3P12111 3177 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 IGKV1D-8A0A087WSZ0 117 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 A0A0A6YYD4 124 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 SRRM5B3KS81 715 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 CA7P43166 264 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 C21orf62Q9NYP8 219 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 CLDN16Q9Y5I7 305 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 IGHV3-49A0A0A0MS15 119 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 TRGC2P03986 189 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 IGFBP2P18065 325 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 CD81P60033 236 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 MYOZ3Q8TDC0 251 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 SRSF12Q8WXF0 261 aaKnown RBP9.43□□□□□ -0.9
USP6NL-201ENST00000277575 TMEM133Q9H2Q1 129 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 NBEAP1P0C6P0 100 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 AGAP20933 346 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 RNF222A6NCQ9 220 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 THBDP07204 575 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms