RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 INSIG2Q9Y5U4 225 aa7.75□□□□□ -1.17
TRIM55-201ENST00000276573 MALRD1Q5VYJ5 2156 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 IGHV3-72A0A0B4J1Y9 119 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 IGHV1-3A0A0C4DH29 117 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 FNDC10F2Z333 226 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 INS-IGF2F8WCM5 200 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 LY6LH3BQJ8 138 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 EIF3GO75821 320 aaKnown RBP eCLIP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 RNASE2P10153 161 aaKnown RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 COX7A1P24310 79 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 OPRK1P41145 380 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 GPR6P46095 362 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 ERHP84090 104 aaKnown RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 BSXQ3C1V8 233 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 VMA21Q3ZAQ7 101 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 FAM122CQ6P4D5 195 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 TMEM88Q6PEY1 159 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 MOB3BQ86TA1 216 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 PNKDQ8N490 385 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 TEX45Q8NA69 505 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 OR4P4Q8NGL7 312 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 RAB24Q969Q5 203 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 MGST2Q99735 147 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 ZNF430Q9H8G1 570 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 UNKLQ9H9P5 680 aaKnown RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 AMMECR1Q9Y4X0 333 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 LSM4Q9Y4Z0 139 aaKnown RBP7.74□□□□□ -1.17
TRIM55-201ENST00000276573 HIVEP3Q5T1R4 2406 aa7.74□□□□□ -1.17
TRIM55-201ENST00000276573 ZFP92A6NM28 416 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 E7EUB6 86 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 M0R1W7 72 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 SLC25A17O43808 307 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 EFNA4P52798 201 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 MRGPRG-AS1Q2M3A8 158 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 CBLN2Q8IUK8 224 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 SLC25A22Q9H936 323 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 SMG1Q96Q15 3661 aaKnown RBP7.73□□□□□ -1.17
TRIM55-201ENST00000276573 A0A1W2PN81 502 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 CGB1A6NKQ9 187 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 SEC14L6B5MCN3 397 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 HMGB3O15347 200 aaKnown RBP7.73□□□□□ -1.17
TRIM55-201ENST00000276573 YIF1AO95070 293 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 IFNA1P01562 189 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 CRYGBP07316 175 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 BCL2P10415 239 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 CHRNA7P36544 502 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 MIC13Q5XKP0 118 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
TRIM55-201ENST00000276573 OR11H6Q8NGC7 330 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 GGTLC1Q9BX51 225 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 TMPRSS5Q9H3S3 457 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 VAX2Q9UIW0 290 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
TRIM55-201ENST00000276573 C7orf77A4D0Y5 90 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 M0R036 132 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 SNRNP70P08621 437 aaKnown RBP7.72□□□□□ -1.17
TRIM55-201ENST00000276573 PRTN3P24158 256 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 RAB31Q13636 194 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 PSG5Q15238 335 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 AWAT1Q58HT5 328 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 GCSAMLQ5JQS6 135 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 C1orf122Q6ZSJ8 110 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 RPEQ96AT9 228 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 P2RX4Q99571 388 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 RPS10P5Q9NQ39 176 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 PUS1Q9Y606 427 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRIM55-201ENST00000276573 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
TRIM55-201ENST00000276573 OVOL3O00110 214 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 CNTFRP26992 372 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 HTR1DP28221 377 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 GPX4P36969 197 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-201ENST00000276573 RPL29P47914 159 aaKnown RBP7.71□□□□□ -1.17
TRIM55-201ENST00000276573 CDC34P49427 236 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-201ENST00000276573 CEBPGP53567 150 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 WT1-ASQ06250 92 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 MLANAQ16655 118 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 TMEM249Q2WGJ8 235 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 AKIRIN2Q53H80 203 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 C10orf55Q5SWW7 151 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 LDLRAD2Q5SZI1 272 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 TPTE2P1Q5T6R2 138 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 HCP5Q6MZN7 132 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 TMEM144Q7Z5S9 345 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 SLC35E3Q7Z769 313 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 RNF5Q99942 180 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 SIRT7Q9NRC8 400 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 DPM3Q9P2X0 92 aa7.71□□□□□ -1.17
TRIM55-201ENST00000276573 LRBAP50851 2863 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 LOC105371267A0A1B0GV96 52 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 A0A1W2PPV4 95 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 H3BQ15 152 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
TRIM55-201ENST00000276573 SUB1P53999 127 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRIM55-201ENST00000276573 CD69Q07108 199 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 GAMTQ14353 236 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 PRSS8Q16651 343 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms