RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SSX2Q16385 188 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 DPPA3Q6W0C5 159 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 HSD17B13Q7Z5P4 300 aaPredicted RBP11.38□□□□□ -0.59
SDF2-201ENST00000247020 CENPVQ7Z7K6 275 aaPredicted RBP11.38□□□□□ -0.59
SDF2-201ENST00000247020 COMMD7Q86VX2 200 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 OR2G3Q8NGZ4 309 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 CXorf58Q96LI9 332 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 SRSF8Q9BRL6 282 aaKnown RBP11.38□□□□□ -0.59
SDF2-201ENST00000247020 KIAA1456Q9P272 454 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 TNCP24821 2201 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
SDF2-201ENST00000247020 ACTL6BO94805 426 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 SNRNP70P08621 437 aaKnown RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 MYOD1P15172 320 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 MDKP21741 143 aaPredicted RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 SAA4P35542 130 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 EIF4E3Q8N5X7 224 aaKnown RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 Q8N6K4 173 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 LINC01356Q8N9X3 169 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
SDF2-201ENST00000247020 EAF1Q96JC9 268 aaPredicted RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 USP9YO00507 2555 aaPredicted RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 WNK2Q9Y3S1 2297 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 A0A1W2PRD5 423 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 A0A1W2PRF3 423 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 A0A1W2PRM7 423 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 J3QLI3 93 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 CA2P00918 260 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 IFNA4P05014 189 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 CNTFRP26992 372 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 SNCAP37840 140 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 RPL27AP46776 148 aaKnown RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 COMPP49747 757 aaPredicted RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
SDF2-201ENST00000247020 MMDQ15546 238 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 ZNF114Q8NC26 417 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 RBMXL1Q96E39 390 aaKnown RBP11.37□□□□□ -0.59
SDF2-201ENST00000247020 AJUBAQ96IF1 538 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 TPSG1Q9NRR2 321 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
SDF2-201ENST00000247020 ANKRD17O75179 2603 aaKnown RBP11.36□□□□□ -0.59
SDF2-201ENST00000247020 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 TSPAN9O75954 239 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
SDF2-201ENST00000247020 TNXAQ16473 311 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 PXDC1Q5TGL8 231 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 IL34Q6ZMJ4 242 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
SDF2-201ENST00000247020 LYPD6BQ8NI32 183 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 C1RLQ9NZP8 487 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
SDF2-201ENST00000247020 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 MFSD2BA6NFX1 497 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 C17orf112F2Z3M2 114 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 RUNX1Q01196 453 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 PLGLAQ15195 96 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 Q5PR19 223 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 Q6ZRG5 221 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
SDF2-201ENST00000247020 REG4Q9BYZ8 158 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
SDF2-201ENST00000247020 E7EUB6 86 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 PRH1P02810 166 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 OPN1MWP04001 364 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 OPN1MW2P0DN77 364 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 OPN1MW3P0DN78 364 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 CAMLGP49069 296 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 BPIFB3P59826 476 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 PJVKQ0ZLH3 352 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 HES1Q14469 280 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 C5orf64Q2M2E5 130 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 BTNL8Q6UX41 500 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 CITED4Q96RK1 184 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 C7orf69Q9H7B7 122 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 HIF1ANQ9NWT6 349 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 CRYBG3Q68DQ2 2970 aa11.34□□□□□ -0.59
SDF2-201ENST00000247020 FBN2P35556 2912 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 MBP02144 154 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 TMEM11P17152 192 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 FGF7P21781 194 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
SDF2-201ENST00000247020 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 TUSC1Q2TAM9 212 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
SDF2-201ENST00000247020 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms