RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEC61B-201ENST00000223641 GNB1P62873 340 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 CD83Q01151 205 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 NEURL2Q9BR09 285 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 PRSS22Q9GZN4 317 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 RBKSQ9H477 322 aa11.07□□□□□ -0.64
SEC61B-201ENST00000223641 RANGRFQ9HD47 186 aaPredicted RBP11.07□□□□□ -0.64
SEC61B-201ENST00000223641 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
SEC61B-201ENST00000223641 A0A1W2PN81 502 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 H0YIZ8 118 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 ATP6V0E1O15342 81 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 MED6O75586 246 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 CCNKO75909 580 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 NXPH3O95157 252 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 MPC2O95563 127 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 LYL1P12980 280 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 CHRNA7P36544 502 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 PAX9P55771 341 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 HSD17B13Q7Z5P4 300 aaPredicted RBP11.06□□□□□ -0.64
SEC61B-201ENST00000223641 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 MAGT1Q9H0U3 335 aa11.06□□□□□ -0.64
SEC61B-201ENST00000223641 TRAV14DV4A0A0A6YYC5 116 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 DEDDO75618 318 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 LY86O95711 162 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 TMEM50AO95807 157 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 TAS2R30P59541 319 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 WT1-ASQ06250 92 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 BSXQ3C1V8 233 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 Q5BKY6 102 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 Q6ZSV7 163 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 AKAP14Q86UN6 197 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 TCTE3Q8IZS6 198 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 GRPEL2Q8TAA5 225 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 DTD1Q8TEA8 209 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 SMIM8Q96KF7 97 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 RAB40CQ96S21 281 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
SEC61B-201ENST00000223641 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
SEC61B-201ENST00000223641 CEBPZOSA8MTT3 80 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 AP4M1O00189 453 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 SCGB1D2O95969 90 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 CRYGCP07315 174 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 CTRB1P17538 263 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 FGL1Q08830 312 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 SPINK9Q5DT21 86 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 PRSS54Q6PEW0 395 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 TTC9CQ8N5M4 171 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 OR2C3Q8N628 320 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 ZNF114Q8NC26 417 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 OR2T35Q8NGX2 323 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 CIB3Q96Q77 187 aaPredicted RBP11.04□□□□□ -0.64
SEC61B-201ENST00000223641 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 C16orf95Q9H693 158 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 LSM5Q9Y4Y9 91 aaKnown RBP11.04□□□□□ -0.64
SEC61B-201ENST00000223641 WSB1Q9Y6I7 421 aa11.04□□□□□ -0.64
SEC61B-201ENST00000223641 NPIPB5A8MRT5 1133 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 WRBO00258 174 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 SSSCA1O60232 199 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 NDUFA7O95182 113 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 RLN2P04090 185 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 PET100P0DJ07 73 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 AREGP15514 252 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
SEC61B-201ENST00000223641 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
SEC61B-201ENST00000223641 CFHR3Q02985 330 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
SEC61B-201ENST00000223641 C11orf87Q6NUJ2 197 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 HIPK2Q9H2X6 1198 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 SERTAD4Q9NUC0 356 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 OR5AC2Q9NZP5 309 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 U3KQ87 197 aa11.03□□□□□ -0.64
SEC61B-201ENST00000223641 E5RGE8 158 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 G3V318 75 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 TSC22D2O75157 780 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 BRI3O95415 125 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 CRYBA1P05813 215 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 OR13C7P0DN81 318 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 IAPPP10997 89 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 SLC25A4P12235 298 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 HOXA1P49639 335 aaPredicted RBP11.02□□□□□ -0.65
SEC61B-201ENST00000223641 ATP5IP56385 69 aaPredicted RBP11.02□□□□□ -0.65
SEC61B-201ENST00000223641 S100A10P60903 97 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 CD300CQ08708 224 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms