RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Defb33Q30KN3 62 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Defa-rs10Q64263 91 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hide1Q75VT8 222 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr180Q7TS48 317 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tmprss11fQ8BHM9 439 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1368Q8VFG3 314 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Gtf3aQ8VHT7 364 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 FrkQ922K9 512 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1326-ps1A0A140T8J7 311 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp229E9PWT2 705 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hist1h1aP43275 213 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Polr2gP62488 172 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Lclat1Q3UN02 376 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Clec4a1Q80UI7 245 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp874aQ8BX23 447 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1411Q8VFC4 323 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mus81Q91ZJ0 551 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Plxnb3Q9QY40 1902 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr906K7N5P3 311 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rab5cP35278 216 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mcpt8P43430 247 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fblim1Q71FD7 375 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rcc1Q8VE37 421 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ndufa2Q9CQ75 99 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Eif3fQ9DCH4 361 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 BokO35425 213 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ca2P00920 260 aaKnown RBP10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Saa2P05367 122 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Gpank1Q61858 372 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1279Q8VF38 313 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vmn1r50Q9EP51 310 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cxcr6Q9EQ16 351 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ighv5-2A0A0A6YVX8 117 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 B2mP01887 119 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 OsmP53347 263 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hist1h2baP70696 127 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hhipl1Q14DK5 791 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Arrdc5Q497K5 325 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zpld1Q8BGZ8 415 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mtfp1Q9CRB8 166 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mpc2Q9D023 127 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr39E9PVX1 319 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cd8bP10300 213 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ube2g2P60605 165 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 SelenohQ3UQA7 116 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp663Q6NXM6 656 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 SpartQ8R1X6 671 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tctn3Q8R2Q6 595 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ssmem1Q9D9Y8 244 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mbnl1Q9JKP5 341 aaKnown RBP10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vmn1r5B2RQT2 315 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mmp27D3YV89 551 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr555E9Q547 315 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vmn1r113G3UWI8 307 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hoxb1P17919 297 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 TaglnP37804 201 aaKnown RBP10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Defa-rs12P50716 91 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr147Q60886 317 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rcl1Q9JJT0 373 aaKnown RBP10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr154Q9QY00 318 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 BC024063A0A1W2P7G7 749 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 PkiaP63248 76 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cd300lbQ3U497 209 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tle1Q62440 770 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 GfralQ6SJE0 393 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 2210407C18RikQ6YI28 220 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 IdnkQ8R0J8 184 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 NanpQ9CPT3 248 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 CnmdQ9Z1F6 334 aa10.23□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Gm43720E0CXM8 267 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 P01915 264 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 SelenopP70274 380 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cacfd1Q8BG21 171 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cisd1Q91WS0 108 aaKnown RBP10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Gng10Q9CXP8 68 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Btbd17Q9DB72 478 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Arid1aA2BH40 2283 aaKnown RBP10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr467L7N455 308 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 DffbO54788 344 aaKnown RBP10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slc25a35Q5SWT3 300 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ppp1r3cQ7TMB3 317 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tmem116A0A0G2JGD3 401 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 P18532 116 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rpl31P62900 125 aaKnown RBP10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Spata22Q5SV06 358 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ifna13Q80SU4 189 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Bricd5Q8BV89 174 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr827Q8VEV5 322 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr355Q8VFP6 310 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cldn1O88551 211 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ifna6P07350 189 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Defa-rs1P17533 116 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slc25a4P48962 298 aaKnown RBP10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vamp3P63024 103 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp936Q3ULA8 456 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zdhhc23Q5Y5T3 425 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tcf15Q60756 195 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ifna14Q810G3 189 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Plekha2Q9ERS5 425 aa10.22□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Nkx6-2D3Z4R4 277 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms