RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Gm6993A0A1W2P738 69 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 SrsxB2RZI1 361 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr978E9Q985 311 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Prr22F6TNE3 422 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Vmn1r170K7N6W9 304 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 LifP09056 203 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 RhodP97348 210 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Znf784Q8BI69 297 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr531Q8VGL2 304 aa12.39□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm45861A0A1B0GRY3 1923 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ighv5-15A0A0A6YWC7 117 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gabrg3P27681 467 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 FusP56959 518 aaKnown RBP12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cdx4Q07424 282 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Dhrs2Q149L0 282 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lemd1Q14C37 129 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tceal5Q8CCT4 200 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rcc1Q8VE37 421 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lamtor1Q9CQ22 161 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rbfox1Q9JJ43 396 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1214A2ATG3 311 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ascl4M0QW46 144 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tmem255aQ8BHW5 351 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cd99l2Q8BIF0 237 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Slc6a8Q8VBW1 640 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Plppr2Q8VCY8 343 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cep250Q60952 2414 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Esp23A8R0V5 104 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gfi1bO70237 330 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Khdc1bP0C7A0 126 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 ShbgP97497 403 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rps2-ps6A0A140T8L5 221 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Brs3O54798 399 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Atoh7Q9Z2E5 149 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ntsr1O88319 424 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cd3eP22646 189 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1362Q5SZZ8 308 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Q8C3I9 435 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Slc25a1Q8JZU2 311 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ociad1Q9CRD0 247 aaKnown RBP12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Dph7Q9CYU6 477 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Acp1Q9D358 158 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Sgms2Q9D4B1 365 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 PpiaP17742 164 aaKnown RBP12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Acrv1P50289 261 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lrp11Q8CB67 483 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr577Q8VH11 312 aa12.38□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr177E9Q7W1 309 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Scgb2a2J3KMP9 96 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 NrepQ07475 68 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Nkain2Q4PNJ2 208 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Scmh1Q8K214 706 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rab33bO35963 229 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lsm10Q8QZX5 122 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr983Q8VG90 315 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Q9DAN9 164 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Suv39h2Q9EQQ0 477 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Vmn1r167G3UW71 315 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 P01806 116 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Fcgr3P08508 261 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lrtm1Q8BXQ3 356 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tmem212Q8C6V3 187 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rgs13Q8K443 158 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 RpeQ8VEE0 228 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Avpi1Q9D7H4 142 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr972Q9EQA2 314 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Foxj2Q9ES18 565 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tarm1B6A8R8 288 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ear3O35290 156 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Fpr2O88536 351 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ybx1P62960 322 aaKnown RBP12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 CtrcQ3SYP2 268 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gpr183Q3U6B2 357 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1333Q7TQV7 317 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Vmn1r194J3JS27 296 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Hist1h1eP43274 219 aaKnown RBP12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rasl12Q08AT1 266 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr205Q7TS37 305 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr180Q7TS48 317 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pdlim5Q8CI51 591 aaKnown RBP12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ms4a3Q920C4 213 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pfn3Q9DAD6 137 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ahctf1Q8CJF7 2243 aaKnown RBP12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Klkb1P26262 638 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Zfp677Q6PEP4 634 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm38303A0A0A6YWW8 100 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Igkv1-132A0A0B4J1H9 120 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 TrdcA0A0G2JEU3 153 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Mob4Q6PEB6 225 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Dock3Q8CIQ7 2027 aa12.37□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pate1E9Q658 125 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 VhlP40338 181 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 CapzbP47757 277 aaKnown RBP12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gorasp2Q99JX3 451 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 LbhQ9CX60 105 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Brwd3A2AHJ4 1799 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rnf165E9QAU8 347 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 MdficQ8BX65 247 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tmem230Q8CIB6 120 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ifitm3Q9CQW9 137 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 375.5 ms