RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 USP9XQ93008 2570 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 COLCA2A8K830 154 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 IL6RP08887 468 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 GPX4P36969 197 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 ARL16Q0P5N6 197 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 ATP6V1FQ16864 119 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 OR4C12Q96R67 309 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 EPG5Q9HCE0 2579 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 C1QL1O75973 258 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 RNF224P0DH78 156 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 HSPE1P61604 102 aaKnown RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 SLC38A11Q08AI6 406 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 DIAPH2-AS1Q14236 149 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 OR8G2PQ6IF36 304 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 OR10P1Q8NGE3 313 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 OR2G3Q8NGZ4 309 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 TCF19Q9Y242 345 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 ZNF257Q9Y2Q1 563 aa13.35□□□□□ -0.27
PHGDH-216ENST00000641375 SPTAN1Q13813 2472 aaKnown RBP13.35□□□□□ -0.27
PHGDH-216ENST00000641375 SRRM4A7MD48 611 aaKnown RBP13.34□□□□□ -0.27
PHGDH-216ENST00000641375 BUB1B-PAK6H3BSN5 160 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 NPBWR1P48145 328 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 F2RL1P55085 397 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 RELQ04864 619 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-216ENST00000641375 IGFBPL1Q8WX77 278 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-216ENST00000641375 HEYLQ9NQ87 328 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-216ENST00000641375 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 UPK2O00526 184 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 PRH1P02810 166 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 ARG1P05089 322 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 SAA1P0DJI8 122 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-216ENST00000641375 IL34Q6ZMJ4 242 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 Q6ZRG5 221 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 VSTM2AQ8TAG5 236 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 CCL19Q99731 98 aa13.34□□□□□ -0.27
PHGDH-216ENST00000641375 IGHV2-5P01817 119 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 VDAC2P45880 294 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-216ENST00000641375 CAMLGP49069 296 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 ARF6P62330 175 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 TMEM182Q6ZP80 229 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-216ENST00000641375 C1orf122Q6ZSJ8 110 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 Q8N7P7 452 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 OR51B2Q9Y5P1 312 aa13.33□□□□□ -0.28
PHGDH-216ENST00000641375 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 OR8U8P0C7N1 319 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 COX7A1P24310 79 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 RPS16P62249 146 aaKnown RBP13.32□□□□□ -0.28
PHGDH-216ENST00000641375 DEFA6Q01524 100 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 KIR3DL3Q8N743 410 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 OR4P4Q8NGL7 312 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 OR4A5Q8NH83 315 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 ENY2Q9NPA8 101 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 KBTBD11O94819 623 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 IFNA10P01566 189 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 PNKDQ8N490 385 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 OR11H6Q8NGC7 330 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 OR5B3Q8NH48 314 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 LYPD6BQ8NI32 183 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 PFDN5Q99471 154 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 TMPRSS5Q9H3S3 457 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 INSIG2Q9Y5U4 225 aa13.32□□□□□ -0.28
PHGDH-216ENST00000641375 C15orf62A8K5M9 175 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 ENSAO43768 121 aaKnown RBP13.31□□□□□ -0.28
PHGDH-216ENST00000641375 USF1P22415 310 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-216ENST00000641375 PRTN3P24158 256 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 PDLIM4P50479 330 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 DLX1P56177 255 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 RUNX1Q01196 453 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 BTNL8Q6UX41 500 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 THNSL2Q86YJ6 484 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 RPEQ96AT9 228 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 PSMG3Q9BT73 122 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-216ENST00000641375 TMEM147Q9BVK8 224 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 BPESC1Q9GZL8 116 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 WDR61Q9GZS3 305 aaKnown RBP13.31□□□□□ -0.28
PHGDH-216ENST00000641375 IGHV4-39P01824 125 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 LGALS7P47929 136 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 FABP9Q0Z7S8 132 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
PHGDH-216ENST00000641375 IGHV1-3A0A0C4DH29 117 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 RAB11AP62491 216 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 PRCDQ00LT1 54 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms