RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 C15orf61A6NNL5 157 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM3-215ENST00000639856 RBMS3Q6XE24 437 aaKnown RBP12.35□□□□□ -0.43
TRIM3-215ENST00000639856 YPEL4Q96NS1 127 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 TCF19Q9Y242 345 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 ERVFRD-1P60508 538 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 Q8N7P7 452 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 CTSZQ9UBR2 303 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 hCG_1809904A0A1W2PP81 198 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PR64 198 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PRV1 198 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 RRHO14718 337 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 HMGB3O15347 200 aaKnown RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 AGAP20933 346 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 COL8A2P25067 703 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 MEF2CQ06413 473 aaPredicted RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 MALSU1Q96EH3 234 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 GGACTQ9BVM4 153 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 SPTAN1Q13813 2472 aaKnown RBP12.34□□□□□ -0.43
TRIM3-215ENST00000639856 FLNCQ14315 2725 aa12.34□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PPR1 153 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 B4DEV8 164 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 PRSS46E5RG02 174 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 LY6HO94772 140 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
TRIM3-215ENST00000639856 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 GAL3ST2Q9H3Q3 398 aa12.33□□□□□ -0.44
TRIM3-215ENST00000639856 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 CYB5BO43169 146 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 MPDU1O75352 247 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 HRASP01112 189 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 HOXA1P49639 335 aaPredicted RBP12.32□□□□□ -0.44
TRIM3-215ENST00000639856 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
TRIM3-215ENST00000639856 MEF2BQ02080 365 aaPredicted RBP12.32□□□□□ -0.44
TRIM3-215ENST00000639856 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
TRIM3-215ENST00000639856 ABHD12Q8N2K0 398 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 SOX15O60248 233 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 SOD3P08294 240 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 CD81P60033 236 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 HSPE1P61604 102 aaKnown RBP12.32□□□□□ -0.44
TRIM3-215ENST00000639856 HEPN1Q6WQI6 88 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 TMEM170AQ8WVE7 144 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
TRIM3-215ENST00000639856 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 DVL1O14640 695 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 CCL3L1P16619 93 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 PSMB3P49720 205 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 PPOXP50336 477 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 H1FXQ92522 213 aaKnown RBP12.31□□□□□ -0.44
TRIM3-215ENST00000639856 MANBALQ9NQG1 85 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 SMCO3A2RU48 225 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 NDUFB3O43676 98 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 IFNA4P05014 189 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 RTL8BQ17RB0 113 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 LINC00518Q8N0U6 118 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 ZNF714Q96N38 554 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 ZNRD1Q9P1U0 126 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 EPG5Q9HCE0 2579 aa12.31□□□□□ -0.44
TRIM3-215ENST00000639856 SEC14L6B5MCN3 397 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-215ENST00000639856 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-215ENST00000639856 ELOBQ15370 118 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-215ENST00000639856 TMEM200BQ69YZ2 307 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 CBLN4Q9NTU7 201 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
TRIM3-215ENST00000639856 AKAP6Q13023 2319 aa12.3□□□□□ -0.44
TRIM3-215ENST00000639856 TMEM250H0YL14 139 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 NDUFS6O75380 124 aaKnown RBP12.29□□□□□ -0.44
TRIM3-215ENST00000639856 IGKV1-16P04430 117 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 DEFA4P12838 97 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 NPY1RP25929 384 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 OPRK1P41145 380 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 AKR1D1P51857 326 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 C11orf71Q6IPW1 123 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 SLC24A4Q8NFF2 622 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 PRNDQ9UKY0 176 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 RPL35P42766 123 aaKnown RBP12.29□□□□□ -0.44
TRIM3-215ENST00000639856 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
TRIM3-215ENST00000639856 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms