RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PCLOQ9Y6V0 5065 aa-0□□□□□ -2.41
CCDC7-211ENST00000638889 ZNF462Q96JM2 2506 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 PTPN13Q12923 2485 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 C5orf49A4QMS7 147 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 LEPROTO15243 131 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 COCHO43405 550 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 APOMO95445 188 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 CD40LGP29965 261 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 HAAOP46952 286 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 RPL30P62888 115 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 ZNF846Q147U1 533 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 JOSD1Q15040 202 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 ZNHIT3Q15649 155 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 HLA-DRB5Q30154 266 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 RIBC1Q8N443 379 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 SLC37A2Q8TED4 501 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 GNPNAT1Q96EK6 184 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 ANKRD36BP1Q96IX9 119 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 RBP7Q96R05 134 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 OR8D2Q9GZM6 311 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 C10orf95Q9H7T3 257 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 HRASLSQ9HDD0 168 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 BAIAP2Q9UQB8 552 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 PRELID1Q9Y255 219 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 PIEZO1Q92508 2521 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 PTPRQQ9UMZ3 2332 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 ASXL3Q9C0F0 2248 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 MED12LQ86YW9 2145 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 EML5Q05BV3 1969 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 EXPH5Q8NEV8 1989 aa-0.01□□□□□ -2.41
CCDC7-211ENST00000638889 COL4A5P29400 1685 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 SPTBN4Q9H254 2564 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 IGKV1D-42A0A075B6H8 117 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 SHBGP04278 402 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 METTL15P1P0C7V9 234 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 KDELR2P33947 212 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 UBE2IP63279 158 aaKnown RBP-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 COPS6Q7L5N1 327 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 SSX8Q7RTT4 187 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 SPERTQ8NA61 448 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 SGMS2Q8NHU3 365 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 TIPINQ9BVW5 301 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 C1orf109Q9NX04 203 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 JMJD1CQ15652 2540 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 WNK1Q9H4A3 2382 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 MYCBP2O75592 4640 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 CACNA1CQ13936 2221 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 MED12Q93074 2177 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 BDP1A6H8Y1 2624 aa-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
CCDC7-211ENST00000638889 LPAP08519 4548 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 COL7A1Q02388 2944 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 HERC2O95714 4834 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 C2CD3Q4AC94 2353 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 AHCTF1Q8WYP5 2266 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 LOC100506127A0A0U1RQW1 187 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 TEX50A0A1B0GTY4 177 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 C21orf140B9A014 251 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 CCRL2O00421 344 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 STX10O60499 249 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 IL6P05231 212 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 SULT1A3P0DMM9 295 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 SULT1A4P0DMN0 295 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 HLA-DMBP28068 263 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 FXYD2P54710 66 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 SLAMF1Q13291 335 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 Q3ZCU0 254 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 DNAL1Q4LDG9 190 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 OR1M1Q8NGA1 313 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 SIKE1Q9BRV8 207 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 TP53TG1Q9Y2A0 90 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 HMCN2Q8NDA2 5059 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 RNF213Q63HN8 5207 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 PLECQ15149 4684 aaKnown RBP-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 USH2AO75445 5202 aa-0.03□□□□□ -2.41
CCDC7-211ENST00000638889 AKAP6Q13023 2319 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 PCNX1Q96RV3 2341 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 ATRQ13535 2644 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 WNK2Q9Y3S1 2297 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 K7ERQ8 282 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 SLC22A1O15245 554 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 ATP6V1G2O95670 118 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 CSN1S1P47710 185 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 C10orf67Q8IYJ2 551 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 TBC1D19Q8N5T2 526 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 OR7G1Q8NGA0 311 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 OR5L1Q8NGL2 311 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 OR2T27Q8NH04 317 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 HAVCR2Q8TDQ0 301 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 ANKRD7Q92527 254 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 BBS2Q9BXC9 721 aa-0.04□□□□□ -2.42
CCDC7-211ENST00000638889 HES4Q9HCC6 221 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms