RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PSG5Q15238 335 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 PDLIM3Q53GG5 364 aaPredicted RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 OR4A47Q6IF82 309 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 LIN54Q6MZP7 749 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 CCBE1Q6UXH8 406 aaPredicted RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 ZNF562Q6V9R5 426 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 Q71RC1 249 aaPredicted RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 H2BFWTQ7Z2G1 175 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 ADAD2Q8NCV1 583 aaKnown RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 DMBX1Q8NFW5 382 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 C16orf95Q9H693 158 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 PLSCR3Q9NRY6 295 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 TMEM140Q9NV12 185 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 METTL1Q9UBP6 276 aaKnown RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 PRNDQ9UKY0 176 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 FOXA2Q9Y261 457 aaPredicted RBP5.34□□□□□ -1.55
UPF3B-205ENST00000636792 SIGLEC9Q9Y336 463 aa5.34□□□□□ -1.55
UPF3B-205ENST00000636792 TRAV6A0A075B6T7 132 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 A0A1B0GU03 582 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 H3BUA1 57 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 AP4M1O00189 453 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 SLC25A17O43808 307 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 CHST1O43916 411 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 SNAPC5O75971 98 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 SCAF4O95104 1147 aaKnown RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 BRI3O95415 125 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 IGF1P05019 195 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 COMPP49747 757 aaPredicted RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 RPL8P62917 257 aaKnown RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 PRSS8Q16651 343 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 TATDN3Q17R31 274 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 NMSQ5H8A3 153 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 OR2B11Q5JQS5 317 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 TMEM268Q5VZI3 342 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 SELENOHQ8IZQ5 122 aaKnown RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 SLC35G3Q8N808 338 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 OR4F5Q8NH21 305 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 OR52E5Q8NH55 327 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 OR2T6Q8NHC8 308 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 RNASE11Q8TAA1 199 aaKnown RBP5.33□□□□□ -1.56
UPF3B-205ENST00000636792 PDCD10Q9BUL8 212 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 ZFP57Q9NU63 452 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 TMEM14BQ9NUH8 114 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 FLVCR2Q9UPI3 526 aa5.33□□□□□ -1.56
UPF3B-205ENST00000636792 TNCP24821 2201 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 A0A1W2PN81 502 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 TMEM89A2RUT3 159 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 UPK2O00526 184 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 CYB5BO43169 146 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 KRASP01116 189 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 IGKV1-39P01597 117 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 IGKV1-5P01602 117 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 IGKV1D-39P04432 117 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 SULT1A3P0DMM9 295 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 SULT1A4P0DMN0 295 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 HKR1P10072 659 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 ANXA7P20073 488 aaKnown RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 CHRNA7P36544 502 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 CYCSP99999 105 aaKnown RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 TMEM267Q0VDI3 215 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 FOXL1Q12952 345 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 SMCO1Q147U7 214 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 LY6EQ16553 131 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 ANKRD55Q3KP44 614 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 AKIRIN2Q53H80 203 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 FAM209BQ5JX69 171 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 SLC35E3Q7Z769 313 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 TMEM219Q86XT9 240 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 C12orf45Q8N5I9 185 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 COMMD1Q8N668 190 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 OR1L6Q8NGR2 347 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 SGMS2Q8NHU3 365 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 CASTOR1Q8WTX7 329 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 ARPC1AQ92747 370 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 COMMD5Q9GZQ3 224 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 OR51J1Q9H342 316 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 FBXL15Q9H469 300 aa5.32□□□□□ -1.56
UPF3B-205ENST00000636792 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.32□□□□□ -1.56
UPF3B-205ENST00000636792 IGHV7-81A0A0B4J1V7 117 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 SRRM4A7MD48 611 aaKnown RBP5.31□□□□□ -1.56
UPF3B-205ENST00000636792 MED6O75586 246 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 CA2P00918 260 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 AMY1AP04745 511 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 TRAPPC2P0DI81 140 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 TRAPPC2BP0DI82 140 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 PET100P0DJ07 73 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 CD24P25063 80 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 G6PCP35575 357 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 RPL27AP46776 148 aaKnown RBP5.31□□□□□ -1.56
UPF3B-205ENST00000636792 F2RL1P55085 397 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 LINC00205P59089 165 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 SLC35B1P78383 322 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 CX3CL1P78423 397 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 PRCDQ00LT1 54 aa5.31□□□□□ -1.56
UPF3B-205ENST00000636792 TNXAQ16473 311 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms